5XPL-C-A

PDB Title CRYSTAL STRUCTURE OF VDR-LBD COMPLEXED WITH 22S-BUTYL-25- HYDROXYPHENYL-2-METHYLIDENE-19,26,27-TRINOR-25-OXO-1-HYDROXYVITAMIN D3
Resolution (Å) 2.050
Classification TRANSCRIPTION

Protein

Description Vitamin D3 receptor
Organism Rattus norvegicus
Chain A
Length 238
Binding Area (Å2) 515.71
Molecular Weight -
Aromaticity 0.07
Instability -
Isoelectric Point 6.06
Sequence KLSEEQQHIIAILLDAHHKTYDPTYADFRDFRPPVRMSPLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSSAIEVIMLRSNQSFTMDDMSWDCGSQDYKYDVTDVSKAGHTLELIEPLIKFQVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAKLVEAIQDRLSNTLQTYIRCRHPPPGSHQLYAKMIQKLADLRSLNEEHSKQYRSLSPENSMKLTPLVLEVFGX

Peptide

Description Nuclear receptor coactivator 2
Organism Homo sapiens
Chain C
Length 11
Binding Area (Å2) 557.61
Hydrophobic (% a.a.)
45%
Molecular Weight 1347.56
Aromaticity 0.09
Instability 12.03
Isoelectric Point 6.17
Sequence ENALLRYLLDK

Clustering Classification

Sequence cluster S 112
Contact cluster C7
Interface cluster I6

Similar complexes

Is the complex classified in the same cluster?

Complex Sequence cluster
(S112) 		Contact cluster
(C7) 		Interface cluster
(I6)
5xpm-C-A
3afr-C-A
3vt7-C-A
3wtq-C-A
4g1z-B-A
4ynk-C-A
5nky-B-A
5xpn-C-A
6fo8-B-1
2hc4-B-A
3aun-B-A
3o1d-B-A
3vt8-C-A
4g2h-B-A
5awj-C-A
5ow7-B-A
6fod-B-A
2o4j-C-A
3o1e-B-A
3vt9-C-A
4ia1-B-A
5b41-C-A
5ow9-B-A
5xzf-C-A
2o4r-C-A
5b5b-C-A
5owd-B-A
5xzh-C-A
3vtc-B-A
5b5b-F-D
1rjk-C-A
3w0g-C-A
5e7v-B-A
1rk3-C-A
3vjs-C-A
3w0h-C-A
1rkg-C-A
2zfx-C-A
3vjt-C-A
3w0i-C-A
6k5o-C-A
1rkh-C-A
2zl9-C-A
3w0j-C-A
5gic-C-A
2zla-C-A
3vru-C-A
3w5p-C-A
2zlc-C-A
3vrv-C-A
5zwf-C-A
2zmh-C-A
3w5r-C-A
4q0a-D-C
5zwh-C-A
2zmi-C-A
3vt3-C-A
3w5t-C-A
5zwi-C-A
2zmj-C-A
3vt4-C-A
3wt5-C-A
4ruj-B-A
5lga-B-A
3vt5-C-A
3wt6-C-A
4fhh-B-A
3a2h-B-A
3vt6-C-A
4fhi-B-A
5xpo-C-A
3vtb-B-A
3vrt-C-A
5gid-C-A
3w5q-C-A
3vrw-C-A
2zxn-C-A
3wt7-C-A
6jez-C-A
5q12-B-A
5q1b-B-A
6el9-B-A
1m2z-B-A
2ao6-B-A
3mnp-B-A
3p89-B-A
5q0r-B-A
5q13-B-A
5q1b-D-C
1m2z-E-D
3plz-C-A
4a1t-C-A
5q0s-B-A
5q13-D-C
5q1c-B-A
1osv-C-A
3dct-B-A
3plz-D-B
4a1t-D-B
5q0s-D-C
5q14-B-A
5q1c-D-C
6hl0-B-A
1osv-D-B
3e7c-H-A
3okh-B-A
3ruu-B-A
4a1v-C-A
4p6w-B-A
5q0t-B-A
5q14-D-C
5q1d-B-A
6hl1-B-A
1osv-E-B
2q7j-B-A
3e7c-D-B
3oki-B-A
3up0-Q-B
4a1v-D-B
4p6x-B-A
5q0j-B-A
5q0u-B-A
5q15-B-A
5q1d-D-C
5y1j-U-A
6itm-B-A
2q7l-B-A
3fei-Z-A
3oki-D-C
3up3-P-A
4a1x-C-A
4p6x-F-E
5q0j-D-C
5q0u-D-C
5q15-D-C
5q1e-B-A
5y44-B-A
6itm-D-C
2qpy-B-A
3fxv-B-A
3olf-B-A
4a1x-D-B
4p6x-J-I
5g3j-B-A
5q0k-B-A
5q0v-B-A
5q16-B-A
5q1f-B-A
5y49-D-A
3g8i-Z-A
3olf-D-C
4csj-B-A
4p6x-L-K
5g5w-B-A
5q0l-B-A
5q0v-D-C
5q16-D-C
5q1f-D-C
5y49-E-B
3gn8-C-A
3omk-B-A
4dk7-B-A
4pld-B-A
5q0l-D-C
5q0w-B-A
5q17-B-A
5q1g-B-A
5yxl-B-A
6kkb-D-X
1t63-B-A
3gn8-E-B
3omk-D-C
4dk7-D-C
4ple-B-A
5q0m-B-A
5q0x-B-A
5q18-B-A
5q1h-B-A
5yxl-D-C
6oqx-C-A
1yok-B-A
3k22-H-A
3omm-B-A
4dos-B-A
4ple-H-G
5ick-C-B
5q0n-B-A
5q0y-B-A
5q18-D-C
5q1h-D-C
6oqy-C-A
1yok-C-A
3k22-D-B
3omm-D-C
4dos-C-A
5ick-D-A
5q0n-D-C
5q0y-D-C
5q19-B-A
5q1h-F-E
6or1-C-A
1zdt-P-A
3l0e-B-A
3oof-B-A
4e2j-C-A
4qe6-B-A
5l11-C-A
5q0o-B-A
5q0z-B-A
5q19-D-C
5q1h-H-G
1zdt-Q-B
3l3z-B-A
3oof-D-C
4e2j-E-B
5q0o-D-C
5q0z-D-C
5q1a-B-A
5q1i-B-A
6el6-B-A
1gwr-C-A
1zdu-P-A
3mne-B-A
3ook-B-A
4udc-B-A
5nfp-B-A
5q0p-B-A
5q10-B-A
5q1a-D-C
5syz-C-A
6el7-B-A
1gwr-D-B
1zdu-Q-A
3mno-B-A
3ook-D-C
4udd-B-A
5nft-B-A
5q0p-D-C
5q11-B-A