3VRU-C-A

PDB Title VDR LIGAND BINDING DOMAIN IN COMPLEX WITH 2-METHYLIDENE-19,24-DINOR- 1ALPHA,25-DIHYDROXY VITAMIND3
Resolution (Å) 2.000
Classification TRANSCRIPTION

Protein

Description Vitamin D3 receptor
Organism Rattus norvegicus
Chain A
Length 239
Binding Area (Å2) 516.34
Molecular Weight -
Aromaticity 0.07
Instability -
Isoelectric Point 6.06
Sequence KLSEEQQHIIAILLDAHHKTYDPTYADFRDFRPPVRPLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSSAIEVIMLRSNQSFTMDDMSWDCGSQDYKYDVTDVSKAGHTLELIEPLIKFQVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAKLVEAIQDRLSNTLQTYIRCRHPPPGSHQLYAKMIQKLADLRSLNEEHSKQYRSLSFQPENSMKLTPLVLEVFGNX

Peptide

Description 13-meric peptide from Mediator of RNA polymerase II transcription subunit 1
Organism Homo sapiens
Chain C
Length 10
Binding Area (Å2) 550.74
Hydrophobic (% a.a.)
60%
Molecular Weight 1210.51
Aromaticity 0.00
Instability -9.91
Isoelectric Point 8.76
Sequence NHPMLMNLLK

Clustering Classification

Sequence cluster S 184
Contact cluster C7
Interface cluster I6