3AUN-B-A

PDB Title CRYSTAL STRUCTURE OF THE RAT VITAMIN D RECEPTOR LIGAND BINDING DOMAIN COMPLEXED WITH YR335 AND A SYNTHETIC PEPTIDE CONTAINING THE NR2 BOX OF DRIP 205
Resolution (Å) 1.810
Classification TRANSCRIPTION

Protein

Description Vitamin D3 receptor
Organism Rattus norvegicus
Chain A
Length 239
Binding Area (Å2) 424.07
Molecular Weight -
Aromaticity 0.07
Instability -
Isoelectric Point 5.92
Sequence LSEEQQHIIAILLDAHHKTYDPTYADFRDFRPPVRMSPLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSSAIEVIMLRSNQSFTMDDMSWDCGSQDYKYDVTDVSKAGHTLELIEPLIKFQVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAKLVEAIQDRLSNTLQTYIRCRHPPPGSHQLYAKMIQKLADLRSLNEEHSKQYRSLSFQPENSMKLTPLVLEVFGX

Peptide

Description DRIP 205 NR2 box peptide
Organism synthetic construct
Chain B
Length 9
Binding Area (Å2) 463.43
Hydrophobic (% a.a.)
66%
Molecular Weight 1074.36
Aromaticity 0.00
Instability -8.92
Isoelectric Point 6.51
Sequence PMLMNLLKD

Clustering Classification

Sequence cluster S 184
Contact cluster C7
Interface cluster I6