1RKG-C-A

PDB Title CRYSTAL STRUCTURE OF THE RAT VITAMIN D RECEPTOR LIGAND BINDING DOMAIN COMPLEXED WITH 2MBISP AND A SYNTHETIC PEPTIDE CONTAINING THE NR2 BOX OF DRIP 205
Resolution (Å) 1.900
Classification HORMONE/GROWTH FACTOR RECEPTOR

Protein

Description Vitamin D3 receptor
Organism Rattus norvegicus
Chain A
Length 242
Binding Area (Å2) 530.13
Molecular Weight -
Aromaticity 0.07
Instability -
Isoelectric Point 5.92
Sequence KLSEEQQHIIAILLDAHHKTYDPTYADFRDFRPPVRMSPLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSSAIEVIMLRSNQSFTMDDMSWDCGSQDYKYDVTDVSKAGHTLELIEPLIKFQVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAKLVEAIQDRLSNTLQTYIRCRHPPPGSHQLYAKMIQKLADLRSLNEEHSKQYRSLSFQPENSMKLTPLVLEVFGNEX

Peptide

Description Peroxisome proliferator-activated receptor binding protein
Organism Homo sapiens
Chain C
Length 11
Binding Area (Å2) 594.31
Hydrophobic (% a.a.)
54%
Molecular Weight 1325.60
Aromaticity 0.00
Instability -8.10
Isoelectric Point 6.75
Sequence NHPMLMNLLKD

Clustering Classification

Sequence cluster S 184
Contact cluster C7
Interface cluster I6