3GYT-B-A

PDB Title NUCLEAR RECEPTOR DAF-12 FROM PARASITIC NEMATODE STRONGYLOIDES STERCORALIS IN COMPLEX WITH ITS PHYSIOLOGICAL LIGAND DAFACHRONIC ACID DELTA 4
Resolution (Å) 2.400
Classification TRANSCRIPTION

Protein

Description Nuclear hormone receptor of the steroid/thyroid hormone receptors superfamily
Organism Strongyloides stercoralis
Chain A
Length 243
Binding Area (Å2) 439.64
Molecular Weight -
Aromaticity 0.08
Instability -
Isoelectric Point 6.74
Sequence YTLSEKDLKELDSIRDSFQCMNEPLDNDQQASTLAKKEHNPTDILNVMDITMRRLVKMAKRLGAFNEISEAGKFSLLKGGMIEMLTIRGVTVFNADKGVWQTPVDGHSQISFNMFDKLRPDIKDTQKKGFLHFFNLLHSDVRKNDLAIDIIVLMVLFDSKREGLVSQQDKETVEKLHRNYESLLHRYLYSIHKEEAEQRFASIPKALVALRKVAENAVTLFLGAGNTTEAASLPKEFFATNYX

Peptide

Description SRC1
Organism Homo sapiens
Chain B
Length 10
Binding Area (Å2) 499.97
Hydrophobic (% a.a.)
40%
Molecular Weight 1172.37
Aromaticity 0.00
Instability 80.12
Isoelectric Point 6.22
Sequence KSLLQQLLTE

Clustering Classification

Sequence cluster S 173
Contact cluster C1166
Interface cluster I389