5DPW-N-M

PDB Title CRYSTAL STRUCTURE OF PLEKHM1 LIR IN COMPLEX WITH HUMAN LC3C_8-125
Resolution (Å) 2.190
Classification PROTEIN BINDING

Protein

Description Microtubule-associated proteins 1A/1B light chain 3C
Organism Homo sapiens
Chain M
Length 115
Binding Area (Å2) 550.15
Molecular Weight 13506.59
Aromaticity 0.12
Instability 60.69
Isoelectric Point 9.60
Sequence RPFKQRKSLAIRQEEVAGIRAKFPNKIPVVVERYPRETFLPPLDKTKFLVPQELTMTQFLSIIRSRMVLRATEAFYLLVNNKSLVSMSATMAEIYRDYKDEDGFVYMTYASQETF

Peptide

Description Pleckstrin homology domain-containing family M member 1
Organism Homo sapiens
Chain N
Length 9
Binding Area (Å2) 708.13
Hydrophobic (% a.a.)
22%
Molecular Weight 1181.21
Aromaticity 0.22
Instability -4.22
Isoelectric Point 3.57
Sequence EDEWVNVQY

Clustering Classification

Sequence cluster S 249
Contact cluster C24
Interface cluster I39

Similar complexes

Is the complex classified in the same cluster?

Complex Sequence cluster
(S249) 		Contact cluster
(C24) 		Interface cluster
(I39)
5dpw-H-G
5dpw-J-I
5cx3-E-A
5cx3-F-B
5cx3-G-C
5cx3-H-D
5d94-B-A
2k6q-B-A
2zjd-B-A
5wrd-C-A
2zjd-D-C
5yis-D-B
5e6o-G-C
5e6o-H-A
6a9x-A-D
6aaf-B-A
6hoi-F-B
6hol-C-A
6hol-D-B
5l83-D-A
5lxh-E-A
5lxh-F-B
5lxh-G-C
5yip-B-A
4xc2-F-B