5L83-D-A

PDB Title COMPLEX OF POTATO ATG8 PROTEIN WITH A PEPTIDE FROM IRISH POTATO FAMINE PATHOGEN EFFECTOR PROTEIN PEXRD54
Resolution (Å) 1.900
Classification IMMUNE SYSTEM

Protein

Description Autophagy-related protein
Organism Solanum tuberosum
Chain A
Length 112
Binding Area (Å2) 372.46
Molecular Weight 12941.83
Aromaticity 0.10
Instability 40.98
Isoelectric Point 8.11
Sequence GPSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEEHKDEDGFLYMTYSGEN

Peptide

Description ASP-TRP-GLU-ILE-VAL
Organism Phytophthora infestans
Chain D
Length 5
Binding Area (Å2) 552.04
Hydrophobic (% a.a.)
40%
Molecular Weight 660.72
Aromaticity 0.20
Instability 29.54
Isoelectric Point 3.67
Sequence DWEIV

Clustering Classification

Sequence cluster S 652
Contact cluster C24
Interface cluster I45

Similar complexes

Is the complex classified in the same cluster?

Complex Sequence cluster
(S652) 		Contact cluster
(C24) 		Interface cluster
(I45)
5lxh-E-A
5lxh-F-B
5lxh-G-C
5yip-B-A
4xc2-F-B
6a9x-A-D
6aaf-B-A
6hoi-F-B
6hol-C-A
6hol-D-B
5l83-C-B
2l8j-B-A
5azf-C-A
5dpw-N-M
2k6q-B-A
2zjd-B-A
5wrd-C-A
2zjd-D-C
5yis-D-B
5cx3-E-A
5cx3-F-B
5cx3-G-C
5cx3-H-D
5d94-B-A
5dpw-H-G
5dpw-J-I