3U9Q-B-A

PDB Title LIGAND BINDING DOMAIN OF PPARGAMMA COMPLEXED WITH DECANOIC ACID AND PGC-1A PEPTIDE
Resolution (Å) 1.520
Classification TRANSCRIPTION

Protein

Description Peroxisome proliferator-activated receptor gamma
Organism Homo sapiens
Chain A
Length 258
Binding Area (Å2) 466.17
Molecular Weight -
Aromaticity 0.08
Instability -
Isoelectric Point 5.62
Sequence SADLRALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKEVAIRIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLX

Peptide

Description PGC-1a peptide
Organism Homo sapiens
Chain B
Length 9
Binding Area (Å2) 565.55
Hydrophobic (% a.a.)
66%
Molecular Weight 998.30
Aromaticity 0.00
Instability -9.98
Isoelectric Point 10.00
Sequence SLLKKLLLA

Clustering Classification

Sequence cluster S 173
Contact cluster C9
Interface cluster I8

Similar complexes

Is the complex classified in the same cluster?

Complex Sequence cluster
(S173) 		Contact cluster
(C9) 		Interface cluster
(I8)
6fzf-C-A
2fvj-B-A
3sp6-B-A
6fzf-D-B
6izm-C-A
2gtk-B-A
6fzj-C-A
6izn-C-A
6fzj-D-B
3fej-B-A
3v9t-C-A
6fzp-C-A
3fur-H-A
3v9v-C-A
3g9e-B-A
4y29-B-A
5two-B-A
3b1m-B-A
3h0a-E-D
5z5s-C-A
3cs8-B-A
5z6s-C-A
1zgy-B-A
6ad9-B-A
3cwd-D-B
3lmp-C-A
6d94-B-A
3et1-P-A
3qt0-C-A
3et3-P-A
3t03-C-A
4f9m-C-A
2hfp-B-A
3fei-Z-A
3t03-D-B
4hee-Y-X
2npa-B-A
2npa-D-C
3g8i-Z-A
3v9y-B-A
1fm6-E-D
3vn2-C-A
1fm6-Y-X
2p54-B-A
5dvc-B-A
1fm9-E-D
5dwl-B-A
1k74-E-D
5gtn-B-A
5ycn-B-A
5gto-B-A
5ycp-B-A
3kmg-B-A
5gtp-B-A
3kmg-E-D
5ji0-E-D
3cwd-C-A
6k0t-B-A
6k0t-D-C
6ms7-B-A
1rdt-E-D
6ijs-B-A
6ilq-B-A
6oni-D-B
6onj-C-A
6pdz-C-B
6pdz-D-A
6icj-B-A
1u3s-D-B
2a3i-B-A
4afj-Y-B
5l7g-B-A
1u9e-C-A
2a4j-B-A
4b7e-B-A
5l7h-B-A
1u9e-D-B
4b7k-B-A
5mwp-B-A
1x76-C-A
3f7d-B-A
5mwy-B-A
1x76-D-B
5ntw-Q-B
1x78-C-A
4qjr-B-A
5ntw-S-D
1x78-D-B
4uda-B-A
5nu1-P-A
6fzu-P-A
1x7b-C-A
2nv7-C-A
4udb-B-A
5nu1-Q-B
6fzu-Q-B
6nwk-B-A
1x7b-D-B
2nv7-D-B
5q0i-B-A
6g05-P-A
6nwl-B-A
1x7j-C-A
3gyt-B-A
3zrk-X-A
6g05-Q-B
1x7j-D-B
2xum-S-A
3gyu-B-A
3zrk-Y-B
5unj-C-A
6g07-Q-B
1yye-C-A
2y0i-S-A
3h0a-B-A
3zrl-X-A
6g07-S-D
1yye-D-B
3zrl-Y-B
6gev-B-A
1u3r-C-A
1zaf-C-A
3bqd-B-A
3zrm-X-A
6gg8-B-A
1u3r-D-B
1zaf-D-B
3zrm-Y-B
6ggg-B-A
1u3s-C-A
3l3x-B-A
4afj-X-A
5l7e-B-A