3H0A-B-A

PDB Title CRYSTAL STRUCTURE OF PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA (PPARG) AND RETINOIC ACID RECEPTOR ALPHA (RXRA) IN COMPLEX WITH 9-CIS RETINOIC ACID, CO-ACTIVATOR PEPTIDE, AND A PARTIAL AGONIST
Resolution (Å) 2.100
Classification TRANSCRIPTION

Protein

Description Retinoic acid receptor RXR-alpha
Organism Homo sapiens
Chain A
Length 211
Binding Area (Å2) 367.75
Molecular Weight -
Aromaticity 0.07
Instability -
Isoelectric Point 5.82
Sequence EDMPVERILEAELAVENDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLX

Peptide

Description Nuclear receptor coactivator 1, Co-activator Peptide
Organism Homo sapiens
Chain B
Length 11
Binding Area (Å2) 346.53
Hydrophobic (% a.a.)
36%
Molecular Weight 1240.45
Aromaticity 0.00
Instability 22.90
Isoelectric Point 8.44
Sequence TSHKLVQLLTT

Clustering Classification

Sequence cluster S 173
Contact cluster C1087
Interface cluster I9

Similar complexes

Is the complex classified in the same cluster?

Complex Sequence cluster
(S173) 		Contact cluster
(C1087) 		Interface cluster
(I9)
1k74-B-A
4pp5-B-A
5mk4-B-A
1mv9-B-A
5mk4-D-C
1mvc-B-A
4rfw-G-A
5mkj-B-A
1mzn-B-A
2p1t-B-A
4rmd-B-A
5mku-B-A
1mzn-D-C
2p1u-B-A
3kwy-B-A
4rme-B-A
1mzn-F-E
2p1v-B-A
1mzn-H-G
1xiu-E-A
3oap-B-A
1rdt-B-A
1xiu-F-B
3ozj-B-A
3ozj-D-C
4k4j-B-A
4zsh-B-A
3pcu-B-A
4k6i-B-A
5ec9-B-A
4m8e-B-A
5ji0-F-A
3e94-B-A
4m8h-B-A
4oc7-B-A
4poh-B-A
1fm6-V-U
3fug-B-A
4poj-B-A
5lyq-B-A
1fm9-B-A
4pp3-B-A
5mj5-B-A
6a5y-F-D
1x78-C-A
2gtk-B-A
3g9e-B-A
3zrl-X-A
6ad9-B-A
6izn-C-A
1x78-D-B
2nv7-C-A
3gyt-B-A
3zrl-Y-B
4qjr-B-A
6fzf-C-A
6k0t-B-A
1x7b-C-A
2nv7-D-B
3gyu-B-A
3zrm-X-A
6fzf-D-B
6k0t-D-C
1x7b-D-B
3h0a-E-D
3zrm-Y-B
6fzj-C-A
6ms7-B-A
1x7j-C-A
4afj-X-A
5mwp-B-A
6fzj-D-B
6nwk-B-A
1x7j-D-B
3l3x-B-A
4afj-Y-B
4uda-B-A
5mwy-B-A
6fzp-C-A
6nwl-B-A
2xum-S-A
4b7e-B-A
4udb-B-A
5ntw-Q-B
6fzu-P-A
2y0i-S-A
4b7k-B-A
4y29-B-A
5ntw-S-D
6fzu-Q-B
1u3r-C-A
1yye-C-A
3b1m-B-A
5nu1-P-A
6g05-P-A
1u3r-D-B
1yye-D-B
3bqd-B-A
5nu1-Q-B
6g05-Q-B
1u3s-C-A
1zaf-C-A
3cs8-B-A
3sp6-B-A
5q0i-B-A
6g07-Q-B
1u3s-D-B
1zaf-D-B
3u9q-B-A
5l7e-B-A
5two-B-A
6g07-S-D
1u9e-C-A
1zgy-B-A
3f7d-B-A
3v9t-C-A
5l7g-B-A
5unj-C-A
6gev-B-A
1u9e-D-B
2a3i-B-A
3fej-B-A
3v9v-C-A
5l7h-B-A
5z5s-C-A
6gg8-B-A
1x76-C-A
2a4j-B-A
3zrk-X-A
5z6s-C-A
6ggg-B-A
1x76-D-B
2fvj-B-A
3fur-H-A
3zrk-Y-B
6izm-C-A