1RDT-E-D

PDB Title CRYSTAL STRUCTURE OF A NEW REXINOID BOUND TO THE RXRALPHA LIGAND BINDING DOAMIN IN THE RXRALPHA/PPARGAMMA HETERODIMER
Resolution (Å) 2.400
Classification HORMONE/GROWTH FACTOR

Protein

Description Peroxisome proliferator activated receptor gamma
Organism Homo sapiens
Chain D
Length 254
Binding Area (Å2) 261.04
Molecular Weight -
Aromaticity 0.09
Instability -
Isoelectric Point 5.46
Sequence AESADLRALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMEVAIRIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLYX

Peptide

Description LxxLL motif coactivator
Organism Homo sapiens
Chain E
Length 7
Binding Area (Å2) 258.84
Hydrophobic (% a.a.)
42%
Molecular Weight 829.98
Aromaticity 0.00
Instability 69.86
Isoelectric Point 6.00
Sequence KQLSELL

Clustering Classification

Sequence cluster S 122
Contact cluster C669
Interface cluster I8

Similar complexes

Is the complex classified in the same cluster?

Complex Sequence cluster
(S122) 		Contact cluster
(C669) 		Interface cluster
(I8)
3cs8-B-A
3t03-C-A
5two-B-A
1fm6-E-D
3cwd-C-A
3t03-D-B
5ycn-B-A
1fm6-Y-X
3cwd-D-B
3u9q-B-A
5ycp-B-A
1fm9-E-D
3et1-P-A
3v9t-C-A
5z5s-C-A
1k74-E-D
3et3-P-A
3v9v-C-A
5z6s-C-A
1zgy-B-A
3fei-Z-A
3v9y-B-A
6ad9-B-A
2fvj-B-A
3fej-B-A
3vn2-C-A
6d94-B-A
2gtk-B-A
3fur-H-A
4f9m-C-A
6fzf-C-A
2hfp-B-A
3g8i-Z-A
4hee-Y-X
6fzf-D-B
3g9e-B-A
4y29-B-A
6fzj-C-A
3h0a-E-D
5dvc-B-A
6fzj-D-B
3kmg-B-A
5dwl-B-A
6fzp-C-A
2npa-B-A
3kmg-E-D
5gtn-B-A
6izm-C-A
2npa-D-C
3lmp-C-A
5gto-B-A
6izn-C-A
2p54-B-A
3qt0-C-A
5gtp-B-A
3b1m-B-A
3sp6-B-A
5ji0-E-D
2knh-B-A
2kwf-B-A
2mh0-A-B