6DTH-B-A

PDB Title CRYSTAL STRUCTURE OF HAEMOPHILUS INFLUENZAE OPPA COMPLEX WITH RPPGFSPFR
Resolution (Å) 1.960
Classification PEPTIDE BINDING PROTEIN

Protein

Description Periplasmic oligopeptide-binding protein
Organism Haemophilus influenzae
Chain A
Length 513
Binding Area (Å2) 423.68
Molecular Weight 57879.18
Aromaticity 0.11
Instability 34.90
Isoelectric Point 6.07
Sequence QLDEKQHIVINNGAEPQSFDPHKTEGVPESNVAYQLLEGLVTSDSEGKLQPGAAESWENTPDFKTWTFHLRKDAKWSNGDPVTAHDFVFAWRRLVDPATAAPYASYLSYLQVENAQDIIDGKKKPAELGVEAKDDYTFVVHATNPVPYAVSLTTHQSLLPLPQKVVEKLGDAWVKKENYVGNGAYKLANHIINEKIEFERNPLYWNDKETVINSATFLAIENPSTDVARYRAGDLDMTSYGLPPEQFAKLKKELLGEVYVTRTLGTYSYELNNKKAPFDNVNIRKALNLSLDRNVITDKVLGQGQTPTYVFTPTYIEEGHLIQQPAYSKEPMAQRNEEAIKLLEEAGYSKANPLKFSILYNTNENHKKVAIAAASMWKANTKGLIDVKLENQEWKTYIDSRRAGRYDVARAGWHADYNQATTFGNYFLSNSSNNTAKYANPEYDKAMAESYAATDAEGRAKAYAKAEEILGKDYGIVPIFNYVNPRLVKPYVKGYSGKDPQDHIYLRNLYIIK

Peptide

Description ARG-PRO-PRO-GLY-PHE
Organism Haemophilus influenzae
Chain B
Length 5
Binding Area (Å2) 801.04
Hydrophobic (% a.a.)
80%
Molecular Weight 572.66
Aromaticity 0.20
Instability 85.04
Isoelectric Point 9.75
Sequence RPPGF

Clustering Classification

Sequence cluster S 69
Contact cluster C12
Interface cluster I10

Similar complexes

Is the complex classified in the same cluster?

Complex Sequence cluster
(S69) 		Contact cluster
(C12) 		Interface cluster
(I10)
1b51-B-A
2z23-B-A
6dtf-B-A
1b52-B-A
6dtg-B-A
1b58-B-A
3tcg-I-A
1b5i-B-A
3tcg-J-B
1b5j-B-A
3tcg-K-C
1b9j-B-A
3tcg-L-D
1jet-B-A
3tcg-M-E
1b05-B-A
1jeu-B-A
3tcg-N-F
1b32-B-A
1jev-B-A
3tcg-O-G
1b3f-B-A
3tcg-P-H
1b3g-B-A
1ola-B-A
1b3l-B-A
1olc-B-A
1b3l-D-C
1qka-B-A
6dqq-B-A
1b40-B-A
1qkb-B-A
6dqr-B-A
1b46-B-A
2olb-B-A
6dqt-B-A
1b4z-B-A
6dqu-B-A
3drg-B-A
1ny2-4-2
4asq-P-A
4asr-P-A
2wok-B-A