1QKB-B-A

PDB Title OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KVK
Resolution (Å) 1.800
Classification PROTEIN TRANSPORT

Protein

Description PERIPLASMIC OLIGOPEPTIDE-BINDING PROTEIN
Organism Salmonella enterica
Chain A
Length 525
Binding Area (Å2) 340.46
Molecular Weight -
Aromaticity 0.11
Instability -
Isoelectric Point 5.85
Sequence ADVPAGVQLADKQTLVRNNGSEVQSLDPHKIEGVPESNVSRDLFEGLLISDVEGHPSPGVAEKWENKDFKVWTFHLRENAKWSDGTPVTAHDFVYSWQRLADPNTASPYASYLQYGHIANIDDIIAGKKPATDLGVKALDDHTFEVTLSEPVPYFYKLLVHPSVSPVPKSAVEKFGDKWTQPANIVTNGAYKLKNWVVNERIVLERNPQYWDNAKTVINQVTYLPISSEVTDVNRYRSGEIDMTYNNMPIELFQKLKKEIPNEVRVDPYLCTYYYEINNQKAPFNDVRVRTALKLALDRDIIVNKVKNQGDLPAYSYTPPYTDGAKLVEPEWFKWSQQKRNEEAKKLLAEAGFTADKPLTFDLLYNTSDLHKKLAIAVASIWKKNLGVNVNLENQEWKTFLDTRHQGTFDVARAGWCADYNEPTSFLNTMLSDSSNNTAHYKSPAFDKLIADTLKVADDTQRSELYAKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKDPLDNIYVKNLYIIKHXXXXXXXX

Peptide

Description PEPTIDE LYS-VAL-LYS
Organism synthetic construct
Chain B
Length 3
Binding Area (Å2) 641.79
Hydrophobic (% a.a.)
33%
Molecular Weight 373.49
Aromaticity 0.00
Instability -31.23
Isoelectric Point 10.00
Sequence KVK

Clustering Classification

Sequence cluster S 893
Contact cluster C12
Interface cluster I10

Similar complexes

Is the complex classified in the same cluster?

Complex Sequence cluster
(S893) 		Contact cluster
(C12) 		Interface cluster
(I10)
1b51-B-A
3tcg-K-C
1b52-B-A
3tcg-L-D
1b58-B-A
3tcg-M-E
1b5i-B-A
3tcg-N-F
1b5j-B-A
3tcg-O-G
1b9j-B-A
3tcg-P-H
1jet-B-A
6dqq-B-A
1b05-B-A
1jeu-B-A
6dqr-B-A
1b32-B-A
1jev-B-A
6dqt-B-A
1b3f-B-A
1ola-B-A
6dqu-B-A
1b3g-B-A
1olc-B-A
6dtf-B-A
1b3l-B-A
1qka-B-A
6dtg-B-A
1b3l-D-C
2olb-B-A
6dth-B-A
1b40-B-A
2z23-B-A
1b46-B-A
3tcg-I-A
1b4z-B-A
3tcg-J-B