6DQQ-B-A

PDB Title CRYSTAL STRUCTURE OF HAEMOPHILUS INFLUENZAE OPPA COMPLEX WITH ENDOGENOUS PEPTIDE
Resolution (Å) 1.850
Classification PEPTIDE BINDING PROTEIN

Protein

Description Periplasmic oligopeptide-binding protein
Organism Haemophilus influenzae
Chain A
Length 521
Binding Area (Å2) 287.06
Molecular Weight 58712.13
Aromaticity 0.11
Instability 34.75
Isoelectric Point 6.02
Sequence VIVPEGTQLDEKQHIVINNGAEPQSFDPHKTEGVPESNVAYQLLEGLVTSDSEGKLQPGAAESWENTPDFKTWTFHLRKDAKWSNGDPVTAHDFVFAWRRLVDPATAAPYASYLSYLQVENAQDIIDGKKKPAELGVEAKDDYTFVVHATNPVPYAVSLTTHQSLLPLPQKVVEKLGDAWVKKENYVGNGAYKLANHIINEKIEFERNPLYWNDKETVINSATFLAIENPSTDVARYRAGDLDMTSYGLPPEQFAKLKKELLGEVYVTRTLGTYSYELNNKKAPFDNVNIRKALNLSLDRNVITDKVLGQGQTPTYVFTPTYIEEGHLIQQPAYSKEPMAQRNEEAIKLLEEAGYSKANPLKFSILYNTNENHKKVAIAAASMWKANTKGLIDVKLENQEWKTYIDSRRAGRYDVARAGWHADYNQATTFGNYFLSNSSNNTAKYANPEYDKAMAESYAATDAEGRAKAYAKAEEILGKDYGIVPIFNYVNPRLVKPYVKGYSGKDPQDHIYLRNLYIIKH

Peptide

Description ALA-ALA-ALA-ALA
Organism synthetic construct
Chain B
Length 4
Binding Area (Å2) 499.66
Hydrophobic (% a.a.)
100%
Molecular Weight 302.33
Aromaticity 0.00
Instability 7.50
Isoelectric Point 5.57
Sequence AAAA

Clustering Classification

Sequence cluster S 227
Contact cluster C12
Interface cluster I10

Similar complexes

Is the complex classified in the same cluster?

Complex Sequence cluster
(S227) 		Contact cluster
(C12) 		Interface cluster
(I10)
1b3f-B-A
1ola-B-A
1b3g-B-A
1olc-B-A
1b3l-B-A
1qka-B-A
1b3l-D-C
1qkb-B-A
1b40-B-A
2olb-B-A
1b46-B-A
2z23-B-A
1b4z-B-A
6dqr-B-A
1b51-B-A
3tcg-I-A
6dqt-B-A
1b52-B-A
3tcg-J-B
6dqu-B-A
1b58-B-A
3tcg-K-C
6dtf-B-A
1b5i-B-A
3tcg-L-D
6dtg-B-A
1b5j-B-A
3tcg-M-E
6dth-B-A
1b9j-B-A
3tcg-N-F
1jet-B-A
3tcg-O-G
1b05-B-A
1jeu-B-A
3tcg-P-H
1b32-B-A
1jev-B-A
4ka7-C-A
4nz8-C-A
5t63-C-A
5wql-F-D
5wql-H-C
5wql-E-D
3drh-B-A
4c2g-B-A