Execution time: 14.0 seconds
Match RMSD = 0.73
VTR = 0.03
Average AVD = 0.62 Å
Chains(7DEO.pdb ): B versus A
Chains(7DEO_africa_mut.pdb ) B versus A
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7DEO | 871 | 52 | 16 | 18 | 0 | 0 | 4 | 90 |
B7DEO_africa_mut | 871 | 63 | 7 | 17 | 0 | 4 | 4 | 95 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-B | A-B | R106 | E484 | R106 | K484 | Attractive | Repulsive | 1.98 | View |
A-B | A-B | L103 | F490 | L103 | F490 | Hydrophobic | Hydrophobic | 0.37 | View |
A-B | A-B | P101 | L455 | P101 | L455 | Hydrophobic | Hydrophobic | 0.85 | View |
A-B | A-B | R106 | E484 | R106 | K484 | Attractive Hydrogen Bonds | Repulsive | 1.95 | View |
A-B | A-B | D54 | R403 | D54 | R403 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.49 | View |
A-B | A-B | F27 | F486 | F27 | F486 | Hydrophobic | Hydrophobic | 0.41 | View |
A-B | A-B | F59 | Q498 | F59 | Q498 | Hydrophobic | Hydrophobic | 0.23 | View |
A-B | A-B | L103 | F490 | L103 | F490 | Hydrophobic | Hydrophobic | 0.34 | View |
A-B | A-B | R106 | E484 | R106 | K484 | Attractive | Repulsive | 1.97 | View |
A-B | A-B | Y31 | F456 | Y31 | F456 | Hydrophobic | Hydrophobic | 0.94 | View |
A-B | A-B | F27 | F486 | F27 | F486 | Hydrophobic | Hydrophobic | 0.41 | View |
A-B | A-B | F105 | Y449 | F105 | Y449 | Hydrophobic | Hydrophobic | 0.67 | View |
A-B | A-B | Y31 | Y489 | Y31 | Y489 | Hydrophobic | Hydrophobic | 0.67 | View |
A-B | A-B | F105 | Y449 | F105 | Y449 | Aromatic Stacking | Aromatic Stacking | 0.54 | View |
A-B | A-B | N57 | Y495 | N57 | Y495 | Hydrogen Bonds | Hydrogen Bonds | 0.73 | View |
A-B | A-B | P101 | F456 | P101 | F456 | Hydrophobic | Hydrophobic | 0.6 | View |
A-B | A-B | V2 | F486 | V2 | F486 | Hydrophobic | Hydrophobic | 0.43 | View |
A-B | A-B | Y31 | F456 | Y31 | F456 | Hydrophobic | Hydrophobic | 0.56 | View |
A-B | A-B | W52 | Y449 | W52 | Y449 | Hydrophobic | Hydrophobic | 0.82 | View |
A-B | A-B | P101 | Y489 | P101 | Y489 | Hydrophobic | Hydrophobic | 0.46 | View |
A-B | A-B | G102 | Q493 | G102 | Q493 | Hydrogen Bonds | Hydrogen Bonds | 0.9 | View |
A-B | A-B | L103 | F490 | L103 | F490 | Hydrophobic | Hydrophobic | 0.33 | View |
A-B | A-B | P101 | F456 | P101 | F456 | Hydrophobic | Hydrophobic | 0.89 | View |
A-B | A-B | Y53 | Y453 | Y53 | Y453 | Hydrogen Bonds | Hydrogen Bonds | 0.55 | View |
A-B | A-B | S56 | R403 | S56 | R403 | Hydrogen Bonds | Hydrogen Bonds | 0.26 | View |
A-B | A-B | L103 | F490 | L103 | F490 | Hydrophobic | Hydrophobic | 0.3 | View |
A-B | A-B | W52 | Y449 | W52 | Y449 | Hydrophobic | Hydrophobic | 1.79 | View |
A-B | A-B | L103 | F490 | L103 | F490 | Hydrophobic | Hydrophobic | 0.32 | View |
A-B | A-B | L103 | F490 | L103 | F490 | Hydrophobic | Hydrophobic | 0.31 | View |
A-B | A-B | Y31 | Y489 | Y31 | Y489 | Hydrophobic | Hydrophobic | 0.66 | View |
A-B | A-B | Y31 | F456 | Y31 | F456 | Hydrophobic | Hydrophobic | 0.76 | View |
A-B | A-B | L103 | F490 | L103 | F490 | Hydrophobic | Hydrophobic | 0.36 | View |
A-B | A-B | D54 | R403 | D54 | R403 | Attractive | Attractive | 0.64 | View |
A-B | A-B | Y31 | F456 | Y31 | F456 | Hydrophobic | Hydrophobic | 0.42 | View |
A-B | A-B | Y31 | F456 | Y31 | F456 | Hydrophobic | Hydrophobic | 0.94 | View |
A-B | A-B | T234 | G446 | T234 | G446 | Hydrogen Bonds | Hydrogen Bonds | 0.36 | View |
A-B | A-B | L103 | F490 | L103 | F490 | Hydrophobic | Hydrophobic | 0.38 | View |
A-B | A-B | Y31 | F456 | Y31 | F456 | Aromatic Stacking | Aromatic Stacking | 0.49 | View |
A-B | A-B | N57 | Q498 | N57 | Q498 | Hydrogen Bonds | Hydrogen Bonds | 0.66 | View |
A-B | A-B | Y32 | Y489 | Y32 | Y489 | Hydrophobic | Hydrophobic | 0.37 | View |
A-B | A-B | L103 | F490 | L103 | F490 | Hydrophobic | Hydrophobic | 0.36 | View |
A-B | A-B | P101 | F456 | P101 | F456 | Hydrophobic | Hydrophobic | 1.45 | View |
A-B | A-B | D54 | R403 | D54 | R403 | Attractive | Attractive | 0.94 | View |
A-B | A-B | W52 | Y495 | W52 | Y495 | Hydrogen Bonds | Hydrogen Bonds | 0.75 | View |
A-B | A-B | Y31 | F456 | Y31 | F456 | Hydrophobic | Hydrophobic | 0.99 | View |
A-B | A-B | D54 | R403 | D54 | R403 | Attractive | Attractive | 0.96 | View |
A-B | A-B | Y32 | Y489 | Y32 | Y489 | Hydrogen Bonds | Hydrogen Bonds | 0.39 | View |
A-B | A-B | Y32 | Y489 | Y32 | Y489 | Aromatic Stacking | Aromatic Stacking | 0.27 | View |
A-B | A-B | L103 | F490 | L103 | F490 | Hydrophobic | Hydrophobic | 0.36 | View |
A-B | A-B | P101 | Y489 | P101 | Y489 | Hydrophobic | Hydrophobic | 0.46 | View |
A-B | A-B | F105 | Y449 | F105 | Y449 | Hydrophobic | Hydrophobic | 0.66 | View |
A-B | A-B | L103 | F490 | L103 | F490 | Hydrophobic | Hydrophobic | 0.32 | View |
A-B | A-B | D54 | R403 | D54 | R403 | Attractive | Attractive | 0.35 | View |
A-B | A-B | Y31 | Y489 | Y31 | Y489 | Aromatic Stacking | Aromatic Stacking | 0.23 | View |
A-B | A-B | D54 | R403 | D54 | R403 | Attractive | Attractive Hydrogen Bonds | 1.1 | View |
A-B | A-B | L103 | F490 | L103 | F490 | Hydrophobic | Hydrophobic | 0.39 | View |
A-B | A-B | N57 | G496 | N57 | G496 | Hydrogen Bonds | Hydrogen Bonds | 0.74 | View |
A-B | A-B | P101 | Y489 | P101 | Y489 | Hydrophobic | Hydrophobic | 0.64 | View |
A-B | A-B | V2 | F486 | V2 | F486 | Hydrophobic | Hydrophobic | 0.34 | View |
A-B | A-B | F59 | Q498 | F59 | Q498 | Hydrophobic | Hydrophobic | 0.15 | View |
A-B | A-B | Y31 | F456 | Y31 | F456 | Hydrophobic | Hydrophobic | 0.99 | View |
A-B | A-B | F59 | Q498 | F59 | Q498 | Hydrophobic | Hydrophobic | 0.53 | View |
A-B | A-B | Y53 | L455 | Y53 | L455 | Hydrophobic | Hydrophobic | 0.4 | View |
A-B | A-B | R58 | Q498 | R58 | Q498 | Hydrogen Bonds | Hydrogen Bonds | 0.46 | View |
A-B | A-B | F105 | Y449 | F105 | Y449 | Hydrophobic | Hydrophobic | 0.5 | View |
A-B | A-B | L103 | F490 | L103 | F490 | Hydrophobic | Hydrophobic | 0.38 | View |
A-B | A-B | T234 | Y449 | T234 | Y449 | Hydrogen Bonds | Hydrogen Bonds | 0.53 | View |
A-B | A-B | W52 | S494 | W52 | S494 | Hydrogen Bonds | Hydrogen Bonds | 0.64 | View |
A-B | A-B | P101 | Y489 | P101 | Y489 | Hydrophobic | Hydrophobic | 0.49 | View |
A-B | A-B | L103 | F490 | L103 | F490 | Hydrophobic | Hydrophobic | 0.28 | View |
A-B | A-B | P101 | F456 | P101 | F456 | Hydrophobic | Hydrophobic | 0.56 | View |
A-B | A-B | Y31 | Y489 | Y31 | Y489 | Hydrophobic | Hydrophobic | 0.62 | View |
A-B | A-B | Y31 | F456 | Y31 | F456 | Hydrophobic | Hydrophobic | 0.75 | View |
A-B | A-B | L103 | F490 | L103 | F490 | Hydrophobic | Hydrophobic | 0.31 | View |
A-B | A-B | L103 | F490 | L103 | F490 | Hydrophobic | Hydrophobic | 0.34 | View |
A-B | A-B | L103 | F490 | L103 | F490 | Hydrophobic | Hydrophobic | 0.4 | View |
A-B | A-B | Y53 | L455 | Y53 | L455 | Hydrophobic | Hydrophobic | 0.69 | View |
A-B | A-B | D54 | R403 | D54 | R403 | Attractive | Attractive | 0.79 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7DEO | A-B | Y53 | K417 | Hydrogen Bonds | 3.64 | View |
7DEO | A-B | D54 | K417 | Attractive | 5.46 | View |
7DEO | A-B | N57 | N501 | Hydrogen Bonds | 3.40 | View |
7DEO | A-B | R106 | E484 | Attractive | 5.30 | View |
7DEO | A-B | R106 | E484 | Attractive | 4.07 | View |
7DEO | A-B | R106 | E484 | Attractive | 4.03 | View |
7DEO | A-B | R106 | E484 | Attractive, Hydrogen Bonds | 3.24 | View |
7DEO | A-B | R106 | E484 | Attractive, Hydrogen Bonds | 2.78 | View |
7DEO_africa_mut | A-B | Y31 | L455 | Hydrophobic | 4.33 | View |
7DEO_africa_mut | A-B | Y31 | F456 | Hydrophobic | 4.38 | View |
7DEO_africa_mut | A-B | Y31 | F456 | Hydrophobic | 3.74 | View |
7DEO_africa_mut | A-B | Y31 | F456 | Hydrophobic | 4.32 | View |
7DEO_africa_mut | A-B | Y31 | F456 | Hydrophobic | 3.09 | View |
7DEO_africa_mut | A-B | Y31 | F456 | Hydrophobic | 4.20 | View |
7DEO_africa_mut | A-B | Y31 | F456 | Hydrophobic | 3.23 | View |
7DEO_africa_mut | A-B | Y32 | Y489 | Hydrophobic | 4.25 | View |
7DEO_africa_mut | A-B | S56 | Y505 | Hydrogen Bonds | 3.71 | View |
7DEO_africa_mut | A-B | F59 | Q498 | Hydrophobic | 4.30 | View |
7DEO_africa_mut | A-B | P100 | K484 | Hydrophobic | 4.42 | View |
7DEO_africa_mut | A-B | P101 | L455 | Hydrophobic | 4.13 | View |
7DEO_africa_mut | A-B | P101 | K484 | Hydrogen Bonds | 2.69 | View |
7DEO_africa_mut | A-B | P101 | F490 | Hydrogen Bonds | 3.82 | View |
7DEO_africa_mut | A-B | R106 | K484 | Repulsive | 5.66 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |