Execution time: 16.0 seconds
Match RMSD = 0.99
VTR = 0.05
Average AVD = 0.87 Å
Chains(6XCM.pdb ): B versus N
Chains(6XCM_africa_mut.pdb ) B versus N
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A6XCM | 3368 | 13 | 0 | 13 | 0 | 0 | 0 | 26 |
B6XCM_africa_mut | 3365 | 12 | 0 | 16 | 0 | 0 | 0 | 28 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
B-N | B-N | K458 | S30 | K458 | S30 | Hydrogen Bonds | Hydrogen Bonds | 1.03 | View |
B-N | B-N | K417 | Y52 | N417 | Y52 | Hydrophobic | Hydrophobic | 1.23 | View |
B-N | B-N | K458 | S53 | K458 | S53 | Hydrogen Bonds | Hydrogen Bonds | 0.23 | View |
B-N | B-N | F456 | L100 | F456 | L100 | Hydrophobic | Hydrophobic | 1.5 | View |
B-N | B-N | L455 | E99 | L455 | W98 | Hydrophobic | Hydrophobic | 1.62 | View |
B-N | B-N | Y453 | W98 | Y453 | W98 | Hydrophobic | Hydrophobic | 0.85 | View |
B-N | B-N | K417 | Y52 | N417 | Y52 | Hydrophobic | Hydrophobic | 1.29 | View |
B-N | B-N | Q474 | S31 | Q474 | S31 | Hydrogen Bonds | Hydrogen Bonds | 0.65 | View |
B-N | B-N | Y489 | R94 | Y489 | R94 | Hydrogen Bonds | Hydrogen Bonds | 0.46 | View |
B-N | B-N | Y473 | S31 | Y473 | S31 | Hydrogen Bonds | Hydrogen Bonds | 0.67 | View |
B-N | B-N | A475 | N32 | A475 | N32 | Hydrogen Bonds | Hydrogen Bonds | 0.8 | View |
B-N | B-N | F456 | L100 | F456 | L100 | Hydrophobic | Hydrophobic | 1.86 | View |
B-N | B-N | L455 | Y33 | L455 | Y33 | Hydrogen Bonds | Hydrogen Bonds | 0.55 | View |
B-N | B-N | Y473 | S31 | Y473 | S31 | Hydrogen Bonds | Hydrogen Bonds | 0.47 | View |
B-N | B-N | F456 | L100 | F456 | L100 | Hydrophobic | Hydrophobic | 1.63 | View |
B-N | B-N | K458 | S30 | K458 | S30 | Hydrogen Bonds | Hydrogen Bonds | 0.72 | View |
B-N | B-N | R457 | S53 | R457 | S53 | Hydrogen Bonds | Hydrogen Bonds | 0.3 | View |
B-N | B-N | L455 | E99 | L455 | E99 | Hydrophobic | Hydrophobic | 1.05 | View |
B-N | B-N | Y421 | S53 | Y421 | S53 | Hydrogen Bonds | Hydrogen Bonds | 0.54 | View |
B-N | B-N | Y421 | G54 | Y421 | G54 | Hydrogen Bonds | Hydrogen Bonds | 0.55 | View |
B-N | B-N | K458 | G54 | K458 | G54 | Hydrogen Bonds | Hydrogen Bonds | 0.24 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
6XCM | B-N | K417 | Y52 | Hydrophobic | 4.22 | View |
6XCM | B-N | K417 | W98 | Hydrophobic | 3.77 | View |
6XCM | B-N | F456 | L100 | Hydrophobic | 4.34 | View |
6XCM | B-N | F456 | L100 | Hydrophobic | 4.18 | View |
6XCM | B-N | F456 | L100 | Hydrophobic | 3.56 | View |
6XCM_africa_mut | B-N | N417 | Y33 | Hydrogen Bonds | 3.41 | View |
6XCM_africa_mut | B-N | D420 | S56 | Hydrogen Bonds | 3.49 | View |
6XCM_africa_mut | B-N | L455 | W98 | Hydrophobic | 4.13 | View |
6XCM_africa_mut | B-N | L455 | W98 | Hydrophobic | 4.38 | View |
6XCM_africa_mut | B-N | F456 | Y33 | Hydrophobic | 4.38 | View |
6XCM_africa_mut | B-N | F456 | Y33 | Hydrophobic | 4.00 | View |
6XCM_africa_mut | B-N | A475 | S31 | Hydrogen Bonds | 2.71 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |