Download
Propedia v26
| File | Entries (n) | Description | File size | Download |
|---|---|---|---|---|
| Propedia 26 - PDB complexes | 73,392 | ZIP | 3.2GB | propedia_26.zip |
| Propedia 26 - descriptions | 73,392 | CSV | 53MB | propedia_26.csv |
| Propedia 26 - only peptides | 15,356 | ZIP | 52MB | peptides_pdb.zip |
| Propedia26 Multipro - PDB files | 19,759 | ZIP | 2.3GB | multipro.zip |
| Propedia26 Multipro - descriptions | 19,759 | CSV | 35MB | multipro.csv |
| Sequence signatures | 17,018 | ZIP | 10MB | sequence_signature.zip |
| Structural signatures | 15,344 | ZIP | 16MB | structural_signature.zip |
| Clusters | 12 | ZIP | 2MB | clusters.zip |
Propedia Legacy
Download old versions of Propedia (we do not provide support).
Propedia v2.3
| File | Description | File size | Download |
|---|---|---|---|
| Peptides (28,581) | PDB file (zip) | 97MB | peptides2_3.zip |
| Receptors (35,478) | PDB file (zip) | 1.6GB | repeceptor2_3.zip |
| Complexes (49,300) | PDB file (zip) | 2.4GB | complex2_3.zip |
| Interfaces (49,300) | PDB file (zip) | 391MB | interfaces2_3.zip |
| Sequences | FASTA file (zip) | 38MB | sequences2_3.zip |
| Structural signatures (case study 1 and 2) | CSV file (zip) | 14MB | peptides_signature.zip |
Propedia v1
Download CSV File
| File | Description | File size | Download |
|---|---|---|---|
| Complexes | CSV file |
12M | complex.csv |
Download PDB Files
| File | Description | File size | Download |
|---|---|---|---|
| Complexes | PDB format | 860M | complex.zip |
| Peptides | PDB format | 43M | peptide.zip |
| Receptors | PDB format | 592M | receptor.zip |
| Interfaces | PDB format | 55M | interface.zip |
Download Fasta Files
| File | Description | File size | Download |
|---|---|---|---|
| Peptides | Fasta format | 2.2M | peptide.fasta |
| Receptors | Fasta format | 6.5M | receptor.fasta |
Download Database (MySQL)
| File | Description | File size | Download |
|---|---|---|---|
| Database File | SQL format | 54M | propedia.sql |
