5YBA-B-A

PDB Title DIMERIC CYCLOPHILIN FROM T.VAGINALIS IN COMPLEX WITH MYB1 PEPTIDE
Resolution (Å) 2.060
Classification ISOMERASE

Protein

Description Peptidyl-prolyl cis-trans isomerase
Organism Trichomonas vaginalis
Chain A
Length 172
Binding Area (Å2) 409.96
Molecular Weight 19057.77
Aromaticity 0.10
Instability 19.52
Isoelectric Point 7.80
Sequence LKRPKTFFDISIRGDKVGKIVFELFNDIVPKTAENFRALCTGEKGIGKSGMPLSYKGTMFHRIIPQFMIQGGDFTRFNGTGGESIYGMKFDDENFKVKHDKPGLLSMANAGPNTNGSQFFITTVETPWLDGHHCVFGQVIEGMDIVKQIESCGTESGRPRAMCMVTDCGEMK

Peptide

Description Myb1 peptide
Organism Trichomonas vaginalis
Chain B
Length 6
Binding Area (Å2) 566.93
Hydrophobic (% a.a.)
33%
Molecular Weight 763.84
Aromaticity 0.33
Instability 14.75
Isoelectric Point 8.59
Sequence YGPKWN

Clustering Classification

Sequence cluster S 1693
Contact cluster C37
Interface cluster I29

Similar complexes

Is the complex classified in the same cluster?

Complex Sequence cluster
(S1693) 		Contact cluster
(C37) 		Interface cluster
(I29)
1awu-B-A
1awv-G-A
1awv-H-B
1awv-I-C
1awv-J-D
1awv-K-E
1awv-L-F
1awq-B-A
5yba-D-C
1awr-G-A
1awr-H-B
1awr-I-C
1awr-J-D
1awr-K-E
1awr-L-F
2ms4-B-A
4dgb-B-A
6i42-B-A