3CVN-B-A

PDB Title STRUCTURE OF PEROXISOMAL TARGETING SIGNAL 1 (PTS1) BINDING DOMAIN OF TRYPANOSOMA BRUCEI PEROXIN 5 (TBPEX5)COMPLEXED TO T. BRUCEI GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (GAPDH) PTS1 PEPTIDE
Resolution (Å) 2.000
Classification TRANSPORT PROTEIN

Protein

Description Peroxisome targeting signal 1 receptor
Organism Trypanosoma brucei
Chain A
Length 300
Binding Area (Å2) 447.70
Molecular Weight 33604.59
Aromaticity 0.09
Instability 40.93
Isoelectric Point 4.98
Sequence TDYPFEANNPYMYHENPMEEGLSMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLFFFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGEASREATRSMWDFFRMLLNVMNRPDLVELTYAQNVEPFAKEFGLQSMLL

Peptide

Description T. brucei GAPDH PTS1 peptide Ac-DRDAAKL
Organism Trypanosoma brucei
Chain B
Length 5
Binding Area (Å2) 645.29
Hydrophobic (% a.a.)
60%
Molecular Weight 557.69
Aromaticity 0.00
Instability -8.98
Isoelectric Point 11.00
Sequence RAAKL

Clustering Classification

Sequence cluster S 1213
Contact cluster C149
Interface cluster I202

Similar complexes

Is the complex classified in the same cluster?

Complex Sequence cluster
(S1213) 		Contact cluster
(C149) 		Interface cluster
(I202)
3cv0-B-A
3cvl-B-A
3cvp-B-A
1fch-C-A