Execution time: 24.0 seconds
Match RMSD = 0.2
VTR = 0.0
Average AVD = 0.04 Å
Chains(6M0J.pdb ): E versus A
Chains(6M0J_brazil_mut.pdb ) E versus A
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A6M0J | 791 | 34 | 5 | 25 | 0 | 0 | 1 | 65 |
B6M0J_brazil_mut | 791 | 47 | 2 | 23 | 0 | 1 | 2 | 75 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-E | A-E | Q42 | Y449 | Q42 | Y449 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
A-E | A-E | Y41 | N501 | Y41 | Y501 | Hydrogen Bonds | Hydrogen Bonds | 0.16 | View |
A-E | A-E | Y83 | F486 | Y83 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | Y41 | T500 | Y41 | T500 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
A-E | A-E | T27 | A475 | T27 | A475 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | T27 | Y489 | T27 | Y489 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | T27 | Y473 | T27 | Y473 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | K353 | Y505 | K353 | Y505 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | Q24 | N487 | Q24 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
A-E | A-E | Y83 | F486 | Y83 | F486 | Aromatic Stacking | Aromatic Stacking | 0.0 | View |
A-E | A-E | Y83 | F486 | Y83 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | M82 | F486 | M82 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | G354 | G502 | G354 | G502 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
A-E | A-E | T27 | F456 | T27 | F456 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | T27 | F456 | T27 | F456 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | K353 | Y505 | K353 | Y505 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | D355 | T500 | D355 | T500 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
A-E | A-E | F28 | Y489 | F28 | Y489 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
A-E | A-E | K353 | G496 | K353 | G496 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
A-E | A-E | R393 | Y505 | R393 | Y505 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
A-E | A-E | Y83 | F486 | Y83 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | Y83 | N487 | Y83 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
A-E | A-E | Y41 | Q498 | Y41 | Q498 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | K31 | Y489 | K31 | Y489 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | K353 | Y505 | K353 | Y505 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | K353 | Y505 | K353 | Y505 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | Y41 | T500 | Y41 | T500 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
A-E | A-E | K31 | E484 | K31 | K484 | Attractive | Repulsive | 1.1 | View |
A-E | A-E | K353 | Y505 | K353 | Y505 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | T27 | Y489 | T27 | Y489 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | K31 | Y489 | K31 | Y489 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | Q42 | G446 | Q42 | G446 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
A-E | A-E | R357 | T500 | R357 | T500 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
A-E | A-E | K353 | Y505 | K353 | Y505 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | T27 | F456 | T27 | F456 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | Y83 | Y489 | Y83 | Y489 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
A-E | A-E | M82 | F486 | M82 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | Y41 | Q498 | Y41 | Q498 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | K353 | G502 | K353 | G502 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
A-E | A-E | M82 | F486 | M82 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | Q42 | Q498 | Q42 | Q498 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
A-E | A-E | M82 | F486 | M82 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | K31 | Y489 | K31 | Y489 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | K31 | Y489 | K31 | Y489 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | K31 | F456 | K31 | F456 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | E37 | R403 | E37 | R403 | Attractive | Attractive | 0.0 | View |
A-E | A-E | K31 | Y489 | K31 | Y489 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | E37 | Y505 | E37 | Y505 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
A-E | A-E | K353 | Y505 | K353 | Y505 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | D30 | F456 | D30 | F456 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | E37 | Y505 | E37 | Y505 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
A-E | A-E | Y83 | F486 | Y83 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | Y41 | N501 | Y41 | Y501 | Hydrogen Bonds | Hydrogen Bonds | 1.06 | View |
A-E | A-E | Y83 | F486 | Y83 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | D38 | Y449 | D38 | Y449 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
A-E | A-E | D30 | F456 | D30 | F456 | Hydrophobic | Hydrophobic | 0.0 | View |
A-E | A-E | D38 | Y449 | D38 | Y449 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
A-E | A-E | H34 | Y453 | H34 | Y453 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
A-E | A-E | L79 | F486 | L79 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
6M0J | A-E | D30 | K417 | Attractive | 4.02 | View |
6M0J | A-E | D30 | K417 | Attractive, Hydrogen Bonds | 2.90 | View |
6M0J | A-E | K31 | E484 | Attractive | 4.39 | View |
6M0J | A-E | K31 | Q493 | Hydrogen Bonds | 3.61 | View |
6M0J | A-E | E35 | Q493 | Hydrogen Bonds | 3.49 | View |
6M0J_brazil_mut | A-E | E35 | K484 | Attractive | 5.54 | View |
6M0J_brazil_mut | A-E | Y41 | Y501 | Aromatic Stacking | 4.70 | View |
6M0J_brazil_mut | A-E | Y41 | Y501 | Hydrophobic | 4.43 | View |
6M0J_brazil_mut | A-E | Y41 | Y501 | Hydrophobic | 3.93 | View |
6M0J_brazil_mut | A-E | Y41 | Y501 | Hydrophobic | 4.31 | View |
6M0J_brazil_mut | A-E | Y41 | Y501 | Hydrophobic | 4.25 | View |
6M0J_brazil_mut | A-E | Y41 | Y501 | Hydrophobic | 3.24 | View |
6M0J_brazil_mut | A-E | Y41 | Y501 | Hydrophobic | 3.69 | View |
6M0J_brazil_mut | A-E | K353 | Y501 | Hydrophobic | 4.35 | View |
6M0J_brazil_mut | A-E | K353 | Y501 | Hydrophobic | 3.45 | View |
6M0J_brazil_mut | A-E | K353 | Y501 | Hydrophobic | 3.00 | View |
6M0J_brazil_mut | A-E | K353 | Y501 | Hydrophobic | 3.74 | View |
6M0J_brazil_mut | A-E | K353 | Y501 | Hydrophobic | 4.47 | View |
6M0J_brazil_mut | A-E | K353 | Y501 | Hydrophobic | 3.95 | View |
6M0J_brazil_mut | A-E | K353 | Y501 | Hydrophobic | 3.48 | View |
6M0J_brazil_mut | A-E | K353 | Y501 | Hydrogen Bonds | 3.66 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |