Execution time: 44.0 seconds
Match RMSD = 0.45
VTR = 0.01
Average AVD = 0.42 Å
Chains(7ND5.pdb ): B versus H
Chains(7ND5_uk_mut.pdb ) B versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7ND5 | 3406 | 31 | 0 | 26 | 0 | 0 | 0 | 57 |
B7ND5_uk_mut | 3405 | 33 | 0 | 28 | 0 | 0 | 1 | 62 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
B-H | B-H | F486 | V2 | F486 | V2 | Hydrophobic | Hydrophobic | 0.55 | View |
B-H | B-H | Y489 | L99 | Y489 | L99 | Hydrophobic | Hydrophobic | 0.74 | View |
B-H | B-H | Q493 | Y102 | Q493 | Y102 | Hydrogen Bonds | Hydrogen Bonds | 0.5 | View |
B-H | B-H | N460 | G54 | N460 | G54 | Hydrogen Bonds | Hydrogen Bonds | 0.28 | View |
B-H | B-H | S477 | G26 | S477 | G26 | Hydrogen Bonds | Hydrogen Bonds | 0.57 | View |
B-H | B-H | F456 | Y33 | F456 | Y33 | Hydrophobic | Hydrophobic | 0.41 | View |
B-H | B-H | Y421 | Y33 | Y421 | Y33 | Hydrophobic | Hydrophobic | 0.59 | View |
B-H | B-H | L455 | Y33 | L455 | Y33 | Hydrophobic | Hydrophobic | 0.24 | View |
B-H | B-H | K458 | G54 | K458 | G54 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
B-H | B-H | T415 | T56 | T415 | T56 | Hydrophobic | Hydrophobic | 0.45 | View |
B-H | B-H | G416 | Y58 | G416 | Y58 | Hydrogen Bonds | Hydrogen Bonds | 0.21 | View |
B-H | B-H | F486 | V2 | F486 | V2 | Hydrophobic | Hydrophobic | 0.61 | View |
B-H | B-H | N487 | R97 | N487 | R97 | Hydrogen Bonds | Hydrogen Bonds | 0.39 | View |
B-H | B-H | L455 | M100 | L455 | M100 | Hydrophobic | Hydrophobic | 0.44 | View |
B-H | B-H | F456 | Y33 | F456 | Y33 | Hydrophobic | Hydrophobic | 0.42 | View |
B-H | B-H | D420 | T56 | D420 | T56 | Hydrogen Bonds | Hydrogen Bonds | 0.16 | View |
B-H | B-H | F456 | L99 | F456 | L99 | Hydrophobic | Hydrophobic | 0.61 | View |
B-H | B-H | Y421 | G54 | Y421 | G54 | Hydrogen Bonds | Hydrogen Bonds | 0.44 | View |
B-H | B-H | F486 | V2 | F486 | V2 | Hydrophobic | Hydrophobic | 0.5 | View |
B-H | B-H | Y489 | L99 | Y489 | L99 | Hydrophobic | Hydrophobic | 0.42 | View |
B-H | B-H | T415 | Y58 | T415 | Y58 | Hydrogen Bonds | Hydrogen Bonds | 0.19 | View |
B-H | B-H | Q493 | V101 | Q493 | V101 | Hydrophobic | Hydrophobic | 0.27 | View |
B-H | B-H | F456 | L99 | F456 | L99 | Hydrophobic | Hydrophobic | 0.59 | View |
B-H | B-H | G476 | T28 | G476 | T28 | Hydrogen Bonds | Hydrogen Bonds | 0.47 | View |
B-H | B-H | A475 | N32 | A475 | N32 | Hydrogen Bonds | Hydrogen Bonds | 0.59 | View |
B-H | B-H | F486 | V2 | F486 | V2 | Hydrophobic | Hydrophobic | 0.49 | View |
B-H | B-H | Y421 | Y52 | Y421 | Y52 | Hydrophobic | Hydrophobic | 0.73 | View |
B-H | B-H | F486 | V106 | F486 | V106 | Hydrophobic | Hydrophobic | 0.37 | View |
B-H | B-H | L455 | M100 | L455 | M100 | Hydrophobic | Hydrophobic | 0.21 | View |
B-H | B-H | R457 | S53 | R457 | S53 | Hydrogen Bonds | Hydrogen Bonds | 0.2 | View |
B-H | B-H | F456 | Y102 | F456 | Y102 | Hydrophobic | Hydrophobic | 0.48 | View |
B-H | B-H | A475 | T28 | A475 | T28 | Hydrogen Bonds | Hydrogen Bonds | 0.56 | View |
B-H | B-H | F456 | Y102 | F456 | Y102 | Hydrophobic | Hydrophobic | 0.49 | View |
B-H | B-H | Y489 | L99 | Y489 | L99 | Hydrophobic | Hydrophobic | 0.46 | View |
B-H | B-H | N487 | R97 | N487 | R97 | Hydrogen Bonds | Hydrogen Bonds | 0.55 | View |
B-H | B-H | D420 | T56 | D420 | T56 | Hydrogen Bonds | Hydrogen Bonds | 0.15 | View |
B-H | B-H | L455 | Y33 | L455 | Y33 | Hydrogen Bonds | Hydrogen Bonds | 0.43 | View |
B-H | B-H | N487 | G26 | N487 | G26 | Hydrogen Bonds | Hydrogen Bonds | 0.38 | View |
B-H | B-H | F456 | Y33 | F456 | Y33 | Hydrophobic | Hydrophobic | 0.39 | View |
B-H | B-H | S477 | G26 | S477 | G26 | Hydrogen Bonds | Hydrogen Bonds | 0.39 | View |
B-H | B-H | L455 | M100 | L455 | M100 | Hydrophobic | Hydrophobic | 0.2 | View |
B-H | B-H | L455 | Y102 | L455 | Y102 | Hydrophobic | Hydrophobic | 0.52 | View |
B-H | B-H | F456 | Y102 | F456 | Y102 | Hydrophobic | Hydrophobic | 0.48 | View |
B-H | B-H | L455 | Y102 | L455 | Y102 | Hydrophobic | Hydrophobic | 0.51 | View |
B-H | B-H | K458 | S53 | K458 | S53 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
B-H | B-H | Y489 | L99 | Y489 | L99 | Hydrophobic | Hydrophobic | 0.44 | View |
B-H | B-H | Y421 | S53 | Y421 | S53 | Hydrogen Bonds | Hydrogen Bonds | 0.41 | View |
B-H | B-H | K417 | M100 | K417 | M100 | Hydrophobic | Hydrophobic | 0.57 | View |
B-H | B-H | Y489 | R97 | Y489 | R97 | Hydrogen Bonds | Hydrogen Bonds | 0.2 | View |
B-H | B-H | Y489 | L99 | Y489 | L99 | Hydrophobic | Hydrophobic | 0.51 | View |
B-H | B-H | Y473 | S53 | Y473 | S53 | Hydrogen Bonds | Hydrogen Bonds | 0.27 | View |
B-H | B-H | S477 | T28 | S477 | T28 | Hydrogen Bonds | Hydrogen Bonds | 0.37 | View |
B-H | B-H | Y421 | S53 | Y421 | S53 | Hydrogen Bonds | Hydrogen Bonds | 0.38 | View |
B-H | B-H | F486 | V2 | F486 | V2 | Hydrophobic | Hydrophobic | 0.54 | View |
B-H | B-H | Y473 | S31 | Y473 | S31 | Hydrogen Bonds | Hydrogen Bonds | 0.41 | View |
B-H | B-H | K417 | M100 | K417 | M100 | Hydrophobic | Hydrophobic | 0.53 | View |
B-H | B-H | T415 | Y58 | T415 | Y58 | Hydrogen Bonds | Hydrogen Bonds | 0.22 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7ND5_uk_mut | B-H | K417 | Y52 | Hydrophobic | 4.17 | View |
7ND5_uk_mut | B-H | Y421 | Y33 | Hydrogen Bonds | 3.88 | View |
7ND5_uk_mut | B-H | F456 | Y102 | Hydrophobic | 4.48 | View |
7ND5_uk_mut | B-H | A475 | T28 | Hydrogen Bonds | 3.34 | View |
7ND5_uk_mut | B-H | Y489 | Y102 | Aromatic Stacking | 5.60 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |