Execution time: 24.0 seconds
Match RMSD = 1.05
VTR = 0.07
Average AVD = 0.99 Å
Chains(7ND4.pdb ): B versus G
Chains(7ND4_uk_mut.pdb ) B versus G
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7ND4 | 3729 | 10 | 7 | 6 | 0 | 1 | 1 | 25 |
B7ND4_uk_mut | 3726 | 19 | 7 | 8 | 0 | 1 | 1 | 36 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
B-G | B-G | L455 | Y51 | L455 | Y51 | Hydrophobic | Hydrophobic | 0.94 | View |
B-G | B-G | E406 | D53 | E406 | D53 | Repulsive | Repulsive | 1.42 | View |
B-G | B-G | R403 | D53 | R403 | D53 | Attractive | Attractive | 1.33 | View |
B-G | B-G | G502 | D61 | G502 | D61 | Hydrogen Bonds | Hydrogen Bonds | 1.12 | View |
B-G | B-G | L455 | L54 | L455 | L54 | Hydrophobic | Hydrophobic | 0.52 | View |
B-G | B-G | R403 | D53 | R403 | D53 | Attractive | Attractive | 1.41 | View |
B-G | B-G | F456 | Y51 | F456 | Y51 | Aromatic Stacking | Aromatic Stacking | 0.45 | View |
B-G | B-G | L455 | Y51 | L455 | Y51 | Hydrophobic | Hydrophobic | 0.87 | View |
B-G | B-G | K417 | D52 | K417 | D52 | Attractive | Attractive | 0.37 | View |
B-G | B-G | L455 | Y51 | L455 | Y51 | Hydrogen Bonds | Hydrogen Bonds | 0.45 | View |
B-G | B-G | R403 | D53 | R403 | D53 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 1.53 | View |
B-G | B-G | L455 | Y51 | L455 | Y51 | Hydrophobic | Hydrophobic | 1.14 | View |
B-G | B-G | L455 | Y51 | L455 | Y51 | Hydrophobic | Hydrophobic | 0.95 | View |
B-G | B-G | F456 | Y51 | F456 | Y51 | Hydrophobic | Hydrophobic | 0.96 | View |
B-G | B-G | F456 | Y51 | F456 | Y51 | Hydrophobic | Hydrophobic | 1.12 | View |
B-G | B-G | R403 | D53 | R403 | D53 | Attractive | Attractive | 1.4 | View |
B-G | B-G | L455 | Y51 | L455 | Y51 | Hydrophobic | Hydrophobic | 0.87 | View |
B-G | B-G | Y505 | D53 | Y505 | D53 | Hydrogen Bonds | Hydrogen Bonds | 1.73 | View |
B-G | B-G | F456 | Y51 | F456 | Y51 | Hydrophobic | Hydrophobic | 0.98 | View |
B-G | B-G | K417 | Y51 | K417 | Y51 | Hydrogen Bonds | Hydrogen Bonds | 0.5 | View |
B-G | B-G | F456 | Y51 | F456 | Y51 | Hydrophobic | Hydrophobic | 0.91 | View |
B-G | B-G | R403 | D53 | R403 | D53 | Attractive | Attractive | 0.8 | View |
B-G | B-G | R403 | D53 | R403 | D53 | Attractive | Attractive | 0.92 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7ND4 | B-G | R403 | D53 | Hydrogen Bonds | 3.57 | View |
7ND4_uk_mut | B-G | K417 | Y51 | Hydrophobic | 4.46 | View |
7ND4_uk_mut | B-G | L455 | Y51 | Hydrophobic | 4.36 | View |
7ND4_uk_mut | B-G | L455 | Y51 | Hydrophobic | 4.18 | View |
7ND4_uk_mut | B-G | F456 | Y51 | Hydrophobic | 4.45 | View |
7ND4_uk_mut | B-G | F456 | Y51 | Hydrophobic | 3.36 | View |
7ND4_uk_mut | B-G | Y501 | L55 | Hydrophobic | 3.82 | View |
7ND4_uk_mut | B-G | Y501 | D61 | Hydrophobic | 3.95 | View |
7ND4_uk_mut | B-G | Y501 | D61 | Hydrophobic | 3.20 | View |
7ND4_uk_mut | B-G | Y501 | D61 | Hydrophobic | 3.25 | View |
7ND4_uk_mut | B-G | Y501 | D61 | Hydrogen Bonds | 2.66 | View |
7ND4_uk_mut | B-G | Y501 | F63 | Hydrogen Bonds | 2.98 | View |
7ND4_uk_mut | B-G | Y505 | L55 | Hydrogen Bonds | 3.79 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |