VTR

1 main matches found (6 matches in total )

Execution time: 28.0 seconds

Match RMSD = 0.31

VTR = 0.0

Average AVD = 0.28 Å

Parameters

Chains(7L3N.pdb ): C versus D

Chains(7L3N_uk_mut.pdb ) C versus D

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7L3N 3056 5 0 1 0 0 0 6
B7L3N_uk_mut 3056 5 0 1 0 0 0 6

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
C-D C-D N440 Y107 N440 Y107 Hydrophobic Hydrophobic 0.26 View
C-D C-D N440 Y107 N440 Y107 Hydrophobic Hydrophobic 0.19 View
C-D C-D N440 Y107 N440 Y107 Hydrophobic Hydrophobic 0.21 View
C-D C-D N440 Y107 N440 Y107 Hydrophobic Hydrophobic 0.21 View
C-D C-D N439 Y107 N439 Y107 Hydrogen Bonds Hydrogen Bonds 0.56 View
C-D C-D N440 Y107 N440 Y107 Hydrophobic Hydrophobic 0.26 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7L3N | 7L3N_uk_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph