VTR
4 main matches found
(7 matches in total )Execution time: 23.0 seconds
Match RMSD = 0.6
VTR = 0.0
Average AVD = 0.56 Å
Parameters
Chains(7KKL.pdb ): C versus B
Chains(7KKL_uk_mut.pdb ) C versus B
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
| Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
|---|---|---|---|---|---|---|---|---|
| A7KKL | 3360 | 3 | 0 | 4 | 0 | 0 | 0 | 7 |
| B7KKL_uk_mut | 3357 | 3 | 0 | 4 | 0 | 0 | 0 | 7 |
Matches
(Conservatives hydrophobic matches are hidden by default)
| Chains | Residues | Contact types | |||||||
|---|---|---|---|---|---|---|---|---|---|
| A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
| B-C | B-C | A104 | A372 | A104 | A372 | Hydrogen Bonds | Hydrogen Bonds | 0.24 | View |
| B-C | B-C | Y108 | V503 | Y108 | V503 | Hydrophobic | Hydrophobic | 0.78 | View |
| B-C | B-C | S102 | A372 | S102 | A372 | Hydrogen Bonds | Hydrogen Bonds | 0.45 | View |
| B-C | B-C | Q39 | N440 | Q39 | N440 | Hydrogen Bonds | Hydrogen Bonds | 0.47 | View |
| B-C | B-C | Y108 | V503 | Y108 | V503 | Hydrophobic | Hydrophobic | 0.84 | View |
| B-C | B-C | Y108 | V503 | Y108 | V503 | Hydrophobic | Hydrophobic | 0.72 | View |
| B-C | B-C | Q111 | P499 | Q111 | P499 | Hydrogen Bonds | Hydrogen Bonds | 0.45 | View |