VTR
4 main matches found
(6 matches in total )Execution time: 22.0 seconds
Match RMSD = 0.77
VTR = 0.05
Average AVD = 0.74 Å
Parameters
Chains(7K8Z.pdb ): A versus L
Chains(7K8Z_uk_mut.pdb ) A versus L
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
| Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
|---|---|---|---|---|---|---|---|---|
| A7K8Z | 3323 | 2 | 0 | 4 | 0 | 0 | 0 | 6 |
| B7K8Z_uk_mut | 3322 | 4 | 0 | 6 | 0 | 0 | 0 | 10 |
Matches
(Conservatives hydrophobic matches are hidden by default)
| Chains | Residues | Contact types | |||||||
|---|---|---|---|---|---|---|---|---|---|
| A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
| A-L | A-L | R346 | W32 | R346 | W32 | Hydrophobic | Hydrophobic | 0.67 | View |
| A-L | A-L | R346 | N92 | R346 | N92 | Hydrogen Bonds | Hydrogen Bonds | 0.85 | View |
| A-L | A-L | R346 | Y91 | R346 | Y91 | Hydrogen Bonds | Hydrogen Bonds | 0.72 | View |
| A-L | A-L | L441 | Y94 | L441 | Y94 | Hydrophobic | Hydrophobic | 1.1 | View |
| A-L | A-L | R346 | N92 | R346 | N92 | Hydrogen Bonds | Hydrogen Bonds | 0.45 | View |
| A-L | A-L | R346 | N92 | R346 | N92 | Hydrogen Bonds | Hydrogen Bonds | 0.63 | View |