VTR

1 main matches found (1 matches in total )

Execution time: 26.0 seconds

Match RMSD = 0.15

VTR = 0.03

Average AVD = 0.15 Å

Parameters

Chains(7JVC.pdb ): E versus G

Chains(7JVC_uk_mut.pdb ) E versus G

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7JVC 4272 0 0 1 0 0 0 1
B7JVC_uk_mut 4272 0 1 12 0 0 0 13

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
E-G E-G F377 S31 F377 S31 Hydrogen Bonds Hydrogen Bonds 0.15 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7JVC | 7JVC_uk_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact
7JVC_uk_mut E-G A372 Y94 Hydrogen Bonds 3.11 View
7JVC_uk_mut E-G S375 S31 Hydrogen Bonds 3.55 View
7JVC_uk_mut E-G T376 S31 Hydrogen Bonds 3.84 View
7JVC_uk_mut E-G T376 S31 Hydrogen Bonds 2.64 View
7JVC_uk_mut E-G T376 S31 Hydrogen Bonds 2.96 View
7JVC_uk_mut E-G K378 D52 Attractive 5.44 View
7JVC_uk_mut E-G S383 E51 Hydrogen Bonds 3.43 View
7JVC_uk_mut E-G S383 E51 Hydrogen Bonds 3.24 View
7JVC_uk_mut E-G S383 E51 Hydrogen Bonds 3.84 View
7JVC_uk_mut E-G R408 S69 Hydrogen Bonds 3.18 View
7JVC_uk_mut E-G R408 S69 Hydrogen Bonds 3.08 View
7JVC_uk_mut E-G R408 S70 Hydrogen Bonds 3.55 View

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph