VTR
4 main matches found
(4 matches in total )Execution time: 9.0 seconds
Match RMSD = 0.42
VTR = 0.04
Average AVD = 0.42 Å
Parameters
Chains(7JMW.pdb ): A versus L
Chains(7JMW_uk_mut.pdb ) A versus L
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
| Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
|---|---|---|---|---|---|---|---|---|
| A7JMW | 622 | 0 | 0 | 4 | 0 | 0 | 0 | 4 |
| B7JMW_uk_mut | 622 | 0 | 2 | 5 | 0 | 0 | 0 | 7 |
Matches
(Conservatives hydrophobic matches are hidden by default)
| Chains | Residues | Contact types | |||||||
|---|---|---|---|---|---|---|---|---|---|
| A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
| A-L | A-L | T415 | T56 | T415 | T56 | Hydrogen Bonds | Hydrogen Bonds | 0.33 | View |
| A-L | A-L | R408 | L54 | R408 | L54 | Hydrogen Bonds | Hydrogen Bonds | 0.55 | View |
| A-L | A-L | R408 | N53 | R408 | N53 | Hydrogen Bonds | Hydrogen Bonds | 0.36 | View |
| A-L | A-L | R408 | L54 | R408 | L54 | Hydrogen Bonds | Hydrogen Bonds | 0.43 | View |