Execution time: 27.0 seconds
Match RMSD = 0.38
VTR = 0.0
Average AVD = 0.36 Å
Chains(7JMP.pdb ): A versus H
Chains(7JMP_uk_mut.pdb ) A versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7JMP | 579 | 11 | 0 | 12 | 0 | 0 | 1 | 24 |
B7JMP_uk_mut | 579 | 12 | 0 | 13 | 0 | 0 | 1 | 26 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-H | A-H | E484 | G54 | E484 | G54 | Hydrogen Bonds | Hydrogen Bonds | 0.42 | View |
A-H | A-H | Y489 | Y33 | Y489 | Y33 | Aromatic Stacking | Aromatic Stacking | 0.21 | View |
A-H | A-H | Y489 | Y33 | Y489 | Y33 | Hydrophobic | Hydrophobic | 0.2 | View |
A-H | A-H | F486 | Y52 | F486 | Y52 | Hydrogen Bonds | Hydrogen Bonds | 0.42 | View |
A-H | A-H | Y449 | N73 | Y449 | N73 | Hydrophobic | Hydrophobic | 0.47 | View |
A-H | A-H | Q493 | S30 | Q493 | S30 | Hydrogen Bonds | Hydrogen Bonds | 0.59 | View |
A-H | A-H | Y449 | N73 | Y449 | N73 | Hydrogen Bonds | Hydrogen Bonds | 0.5 | View |
A-H | A-H | Y449 | S74 | Y449 | S74 | Hydrogen Bonds | Hydrogen Bonds | 0.45 | View |
A-H | A-H | E484 | G54 | E484 | G54 | Hydrogen Bonds | Hydrogen Bonds | 0.33 | View |
A-H | A-H | Y489 | Y52 | Y489 | Y52 | Hydrophobic | Hydrophobic | 0.21 | View |
A-H | A-H | E484 | T56 | E484 | T56 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
A-H | A-H | Y489 | Y52 | Y489 | Y52 | Hydrophobic | Hydrophobic | 0.19 | View |
A-H | A-H | E484 | Y52 | E484 | Y52 | Hydrophobic | Hydrophobic | 0.29 | View |
A-H | A-H | E484 | Y52 | E484 | Y52 | Hydrophobic | Hydrophobic | 0.26 | View |
A-H | A-H | Y449 | N73 | Y449 | N73 | Hydrophobic | Hydrophobic | 0.36 | View |
A-H | A-H | E484 | T53 | E484 | T53 | Hydrogen Bonds | Hydrogen Bonds | 0.23 | View |
A-H | A-H | Y489 | Y33 | Y489 | Y33 | Hydrophobic | Hydrophobic | 0.39 | View |
A-H | A-H | Y489 | Y33 | Y489 | Y33 | Hydrophobic | Hydrophobic | 0.3 | View |
A-H | A-H | E484 | T56 | E484 | T56 | Hydrogen Bonds | Hydrogen Bonds | 0.44 | View |
A-H | A-H | Y449 | N73 | Y449 | N73 | Hydrophobic | Hydrophobic | 0.44 | View |
A-H | A-H | E484 | G55 | E484 | G55 | Hydrogen Bonds | Hydrogen Bonds | 0.45 | View |
A-H | A-H | E484 | T53 | E484 | T53 | Hydrogen Bonds | Hydrogen Bonds | 0.35 | View |
A-H | A-H | Y489 | Y33 | Y489 | Y33 | Hydrophobic | Hydrophobic | 0.34 | View |
A-H | A-H | E484 | Y58 | E484 | Y58 | Hydrogen Bonds | Hydrogen Bonds | 0.58 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |