VTR
3 main matches found
(5 matches in total )Execution time: 46.0 seconds
Match RMSD = 0.79
VTR = 0.06
Average AVD = 0.78 Å
Parameters
Chains(7D0C.pdb ): C versus F
Chains(7D0C_uk_mut.pdb ) C versus F
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
| Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
|---|---|---|---|---|---|---|---|---|
| A7D0C | 3860 | 2 | 0 | 3 | 0 | 0 | 0 | 5 |
| B7D0C_uk_mut | 3860 | 3 | 0 | 5 | 0 | 0 | 1 | 9 |
Matches
(Conservatives hydrophobic matches are hidden by default)
| Chains | Residues | Contact types | |||||||
|---|---|---|---|---|---|---|---|---|---|
| A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
| C-F | C-F | F486 | T57 | F486 | T57 | Hydrophobic | Hydrophobic | 0.63 | View |
| C-F | C-F | Y505 | S30 | Y505 | S30 | Hydrogen Bonds | Hydrogen Bonds | 0.85 | View |
| C-F | C-F | G496 | Y33 | G496 | Y33 | Hydrogen Bonds | Hydrogen Bonds | 0.85 | View |
| C-F | C-F | Y505 | G93 | Y505 | G93 | Hydrogen Bonds | Hydrogen Bonds | 0.92 | View |
| C-F | C-F | F486 | T57 | F486 | T57 | Hydrophobic | Hydrophobic | 0.65 | View |