VTR

10 main matches found (11 matches in total )

Execution time: 27.0 seconds

Match RMSD = 0.25

VTR = 0.02

Average AVD = 0.21 Å

Parameters

Chains(7CWL.pdb ): B versus L

Chains(7CWL_uk_mut.pdb ) B versus L

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7CWL 3900 1 0 10 0 0 0 11
B7CWL_uk_mut 3891 2 0 22 0 1 0 25

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
B-L B-L S375 T69 S375 T69 Hydrogen Bonds Hydrogen Bonds 0.15 View
B-L B-L F377 S67 F377 S67 Hydrogen Bonds Hydrogen Bonds 0.24 View
B-L B-L T376 S67 T376 S67 Hydrogen Bonds Hydrogen Bonds 0.24 View
B-L B-L S375 T69 S375 T69 Hydrogen Bonds Hydrogen Bonds 0.1 View
B-L B-L S375 T69 S375 T69 Hydrogen Bonds Hydrogen Bonds 0.13 View
B-L B-L S375 D70 S375 D70 Hydrogen Bonds Hydrogen Bonds 0.14 View
B-L B-L S375 G68 S375 G68 Hydrogen Bonds Hydrogen Bonds 0.1 View
B-L B-L S375 D70 S375 D70 Hydrogen Bonds Hydrogen Bonds 0.19 View
B-L B-L T376 S67 T376 S67 Hydrogen Bonds Hydrogen Bonds 0.12 View
B-L B-L Y508 R24 Y508 R24 Hydrogen Bonds Hydrogen Bonds 0.32 View
B-L B-L R408 T72 R408 T72 Hydrophobic Hydrophobic 0.59 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7CWL | 7CWL_uk_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact
7CWL_uk_mut B-L R408 R18 Repulsive 5.83 View
7CWL_uk_mut B-L R408 S63 Hydrogen Bonds 3.44 View
7CWL_uk_mut B-L R408 S63 Hydrogen Bonds 2.71 View
7CWL_uk_mut B-L R408 S63 Hydrogen Bonds 3.22 View
7CWL_uk_mut B-L R408 G64 Hydrogen Bonds 3.76 View
7CWL_uk_mut B-L R408 G64 Hydrogen Bonds 2.93 View
7CWL_uk_mut B-L R408 S65 Hydrogen Bonds 3.10 View
7CWL_uk_mut B-L R408 S65 Hydrogen Bonds 2.68 View
7CWL_uk_mut B-L R408 T72 Hydrogen Bonds 3.00 View
7CWL_uk_mut B-L R408 T74 Hydrogen Bonds 2.69 View
7CWL_uk_mut B-L R408 T74 Hydrogen Bonds 2.93 View
7CWL_uk_mut B-L R408 T74 Hydrogen Bonds 3.63 View
7CWL_uk_mut B-L V503 R24 Hydrophobic 4.36 View
7CWL_uk_mut B-L Y508 D70 Hydrogen Bonds 3.73 View

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph