VTR
3 main matches found
(4 matches in total )Execution time: 9.0 seconds
Match RMSD = 0.9
VTR = 0.03
Average AVD = 0.68 Å
Parameters
Chains(7CDI.pdb ): E versus L
Chains(7CDI_uk_mut.pdb ) E versus L
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
| Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
|---|---|---|---|---|---|---|---|---|
| A7CDI | 615 | 1 | 0 | 3 | 0 | 0 | 0 | 4 |
| B7CDI_uk_mut | 615 | 2 | 0 | 4 | 0 | 0 | 0 | 6 |
Matches
(Conservatives hydrophobic matches are hidden by default)
| Chains | Residues | Contact types | |||||||
|---|---|---|---|---|---|---|---|---|---|
| A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
| E-L | E-L | R403 | Y33 | R403 | Y33 | Hydrogen Bonds | Hydrogen Bonds | 0.23 | View |
| E-L | E-L | Y505 | Y92 | Y505 | Y92 | Hydrogen Bonds | Hydrogen Bonds | 0.54 | View |
| E-L | E-L | Y505 | V29 | Y505 | V29 | Hydrophobic | Hydrophobic | 1.67 | View |
| E-L | E-L | Y453 | Y33 | Y453 | Y33 | Hydrogen Bonds | Hydrogen Bonds | 0.28 | View |