VTR

2 main matches found (6 matches in total )

Execution time: 10.0 seconds

Match RMSD = 0.56

VTR = 0.0

Average AVD = 0.49 Å

Parameters

Chains(7BEP.pdb ): E versus L

Chains(7BEP_uk_mut.pdb ) E versus L

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7BEP 2175 4 1 1 0 0 0 6
B7BEP_uk_mut 2175 4 1 1 0 0 0 6

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
E-L E-L L441 T32 L441 T32 Hydrophobic Hydrophobic 0.35 View
E-L E-L L441 T32 L441 T32 Hydrophobic Hydrophobic 0.23 View
E-L E-L L441 T32 L441 T32 Hydrophobic Hydrophobic 0.35 View
E-L E-L R346 D93 R346 D93 Attractive Attractive 0.63 View
E-L E-L L441 T32 L441 T32 Hydrophobic Hydrophobic 0.31 View
E-L E-L N440 S31 N440 S31 Hydrogen Bonds Hydrogen Bonds 1.04 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7BEP | 7BEP_uk_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph