VTR

25 main matches found (61 matches in total )

Execution time: 9.0 seconds

Match RMSD = 0.43

VTR = 0.0

Average AVD = 0.4 Å

Parameters

Chains(7BEL.pdb ): X versus C

Chains(7BEL_uk_mut.pdb ) X versus C

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7BEL 1728 36 11 11 0 3 1 62
B7BEL_uk_mut 1728 37 11 11 0 3 1 63

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
X-C X-C Y396 Y107 Y396 Y107 Hydrophobic Hydrophobic 0.48 View
X-C X-C D428 Y102 D428 Y102 Hydrogen Bonds Hydrogen Bonds 0.68 View
X-C X-C L518 F27 L518 F27 Hydrophobic Hydrophobic 0.2 View
X-C X-C P463 Y53 P463 Y53 Hydrophobic Hydrophobic 0.28 View
X-C X-C K462 Y53 K462 Y53 Hydrophobic Hydrophobic 0.31 View
X-C X-C K462 Y53 K462 Y53 Hydrophobic Hydrophobic 0.3 View
X-C X-C E516 D109 E516 D109 Repulsive Repulsive 0.48 View
X-C X-C R355 Y104 R355 Y104 Hydrophobic Hydrophobic 0.27 View
X-C X-C E516 Y32 E516 Y32 Hydrogen Bonds Hydrogen Bonds 0.26 View
X-C X-C P426 Y102 P426 Y102 Hydrophobic Hydrophobic 0.31 View
X-C X-C K462 D54 K462 D54 Attractive Attractive 0.39 View
X-C X-C K462 D54 K462 D54 Attractive Hydrogen Bonds Attractive Hydrogen Bonds 0.66 View
X-C X-C P463 Y102 P463 Y102 Hydrophobic Hydrophobic 0.28 View
X-C X-C R466 Y106 R466 Y106 Hydrogen Bonds Hydrogen Bonds 0.34 View
X-C X-C P426 Y102 P426 Y102 Hydrophobic Hydrophobic 0.25 View
X-C X-C R357 D109 R357 D109 Attractive Attractive 0.64 View
X-C X-C K462 A103 K462 A103 Hydrophobic Hydrophobic 0.62 View
X-C X-C E516 D109 E516 D109 Repulsive Repulsive 0.6 View
X-C X-C R466 Y106 R466 Y106 Hydrophobic Hydrophobic 0.2 View
X-C X-C P426 Y102 P426 Y102 Hydrophobic Hydrophobic 0.41 View
X-C X-C E516 K98 E516 K98 Attractive Attractive 0.37 View
X-C X-C P463 A103 P463 A103 Hydrogen Bonds Hydrogen Bonds 0.15 View
X-C X-C P426 Y102 P426 Y102 Hydrophobic Hydrophobic 0.4 View
X-C X-C E516 D109 E516 D109 Repulsive Repulsive 0.47 View
X-C X-C P463 Y102 P463 Y102 Hydrophobic Hydrophobic 0.38 View
X-C X-C P463 Y102 P463 Y102 Hydrophobic Hydrophobic 0.4 View
X-C X-C H519 Q1 H519 Q1 Hydrogen Bonds Hydrogen Bonds 0.48 View
X-C X-C E516 K98 E516 K98 Attractive Attractive 0.37 View
X-C X-C R357 D109 R357 D109 Attractive Attractive 0.49 View
X-C X-C R357 D109 R357 D109 Attractive Attractive 0.56 View
X-C X-C P463 Y102 P463 Y102 Hydrophobic Hydrophobic 0.31 View
X-C X-C R357 D109 R357 D109 Attractive Attractive 0.51 View
X-C X-C P426 Y102 P426 Y102 Hydrophobic Hydrophobic 0.34 View
X-C X-C W353 Y104 W353 Y104 Hydrophobic Hydrophobic 0.31 View
X-C X-C E465 A103 E465 A103 Hydrophobic Hydrophobic 0.53 View
X-C X-C Y396 Y107 Y396 Y107 Hydrophobic Hydrophobic 0.47 View
X-C X-C W353 Y104 W353 Y104 Hydrophobic Hydrophobic 0.28 View
X-C X-C Y396 Y107 Y396 Y107 Aromatic Stacking Aromatic Stacking 0.22 View
X-C X-C W353 Y104 W353 Y104 Hydrophobic Hydrophobic 0.31 View
X-C X-C W353 Y104 W353 Y104 Hydrophobic Hydrophobic 0.27 View
X-C X-C P463 Y102 P463 Y102 Hydrophobic Hydrophobic 0.28 View
X-C X-C F464 Y102 F464 Y102 Hydrophobic Hydrophobic 0.43 View
X-C X-C F464 Y104 F464 Y104 Hydrophobic Hydrophobic 0.22 View
X-C X-C R466 Y104 R466 Y104 Hydrogen Bonds Hydrogen Bonds 0.34 View
X-C X-C P463 Y102 P463 Y102 Hydrophobic Hydrophobic 0.41 View
X-C X-C L518 Y32 L518 Y32 Hydrophobic Hydrophobic 0.26 View
X-C X-C P463 Y102 P463 Y102 Hydrophobic Hydrophobic 0.4 View
X-C X-C P463 Y102 P463 Y102 Hydrophobic Hydrophobic 0.38 View
X-C X-C W353 Y104 W353 Y104 Hydrophobic Hydrophobic 0.26 View
X-C X-C P426 Y102 P426 Y102 Hydrophobic Hydrophobic 0.42 View
X-C X-C E465 A103 E465 A103 Hydrophobic Hydrophobic 0.57 View
X-C X-C H519 G26 H519 G26 Hydrogen Bonds Hydrogen Bonds 0.35 View
X-C X-C L518 V2 L518 V2 Hydrophobic Hydrophobic 0.31 View
X-C X-C K462 S56 K462 S56 Hydrogen Bonds Hydrogen Bonds 0.48 View
X-C X-C R357 D109 R357 D109 Attractive Attractive 0.62 View
X-C X-C D428 Y102 D428 Y102 Hydrogen Bonds Hydrogen Bonds 0.83 View
X-C X-C R357 D109 R357 D109 Attractive Attractive 0.69 View
X-C X-C Y396 Y107 Y396 Y107 Hydrophobic Hydrophobic 0.39 View
X-C X-C K462 Y53 K462 Y53 Hydrophobic Hydrophobic 0.38 View
X-C X-C F464 Y104 F464 Y104 Hydrogen Bonds Hydrogen Bonds 0.25 View
X-C X-C R357 D109 R357 D109 Attractive Attractive 0.57 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7BEL | 7BEL_uk_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact
7BEL_uk_mut X-C E465 Y105 Hydrophobic 4.36 View

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph