VTR

13 main matches found (31 matches in total )

Execution time: 10.0 seconds

Match RMSD = 0.43

VTR = 0.01

Average AVD = 0.4 Å

Parameters

Chains(7BEH.pdb ): E versus H

Chains(7BEH_uk_mut.pdb ) E versus H

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7BEH 626 18 0 13 0 0 0 31
B7BEH_uk_mut 626 20 0 14 0 0 0 34

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
E-H E-H E484 N52 E484 N52 Hydrogen Bonds Hydrogen Bonds 0.19 View
E-H E-H Y449 T30 Y449 T30 Hydrophobic Hydrophobic 0.56 View
E-H E-H L492 N54 L492 N54 Hydrogen Bonds Hydrogen Bonds 0.37 View
E-H E-H Y489 M104 Y489 M104 Hydrogen Bonds Hydrogen Bonds 0.3 View
E-H E-H Y489 M104 Y489 M104 Hydrophobic Hydrophobic 0.16 View
E-H E-H L455 F102 L455 F102 Hydrophobic Hydrophobic 0.71 View
E-H E-H Q493 N54 Q493 N54 Hydrogen Bonds Hydrogen Bonds 0.34 View
E-H E-H Q493 F102 Q493 F102 Hydrophobic Hydrophobic 0.33 View
E-H E-H Q493 T30 Q493 T30 Hydrogen Bonds Hydrogen Bonds 0.32 View
E-H E-H Y489 M104 Y489 M104 Hydrophobic Hydrophobic 0.42 View
E-H E-H Y449 T30 Y449 T30 Hydrophobic Hydrophobic 0.54 View
E-H E-H L455 F102 L455 F102 Hydrophobic Hydrophobic 0.49 View
E-H E-H Y489 M104 Y489 M104 Hydrophobic Hydrophobic 0.39 View
E-H E-H Y489 M104 Y489 M104 Hydrophobic Hydrophobic 0.45 View
E-H E-H Y489 M104 Y489 M104 Hydrophobic Hydrophobic 0.62 View
E-H E-H E484 Y33 E484 Y33 Hydrogen Bonds Hydrogen Bonds 0.25 View
E-H E-H Y489 M104 Y489 M104 Hydrophobic Hydrophobic 0.43 View
E-H E-H Y489 M104 Y489 M104 Hydrophobic Hydrophobic 0.39 View
E-H E-H Q493 S103 Q493 S103 Hydrogen Bonds Hydrogen Bonds 0.28 View
E-H E-H L455 F102 L455 F102 Hydrophobic Hydrophobic 0.58 View
E-H E-H F456 M104 F456 M104 Hydrophobic Hydrophobic 0.24 View
E-H E-H S494 T30 S494 T30 Hydrogen Bonds Hydrogen Bonds 0.32 View
E-H E-H Q493 T30 Q493 T30 Hydrogen Bonds Hydrogen Bonds 0.36 View
E-H E-H F456 M104 F456 M104 Hydrophobic Hydrophobic 0.43 View
E-H E-H Y449 T74 Y449 T74 Hydrogen Bonds Hydrogen Bonds 0.41 View
E-H E-H Y489 M104 Y489 M104 Hydrophobic Hydrophobic 0.46 View
E-H E-H L455 F102 L455 F102 Hydrophobic Hydrophobic 0.75 View
E-H E-H E484 S55 E484 S55 Hydrogen Bonds Hydrogen Bonds 0.33 View
E-H E-H E484 S55 E484 S55 Hydrogen Bonds Hydrogen Bonds 0.3 View
E-H E-H F456 M104 F456 M104 Hydrophobic Hydrophobic 0.41 View
E-H E-H Q493 N54 Q493 N54 Hydrogen Bonds Hydrogen Bonds 0.38 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7BEH | 7BEH_uk_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact
7BEH_uk_mut E-H Y449 S77 Hydrogen Bonds 3.71 View
7BEH_uk_mut E-H E484 W50 Hydrophobic 4.43 View
7BEH_uk_mut E-H Y489 M104 Hydrophobic 4.29 View

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph