VTR

17 main matches found (52 matches in total )

Execution time: 8.0 seconds

Match RMSD = 0.0

VTR = 0.0

Average AVD = 0.0 Å

Parameters

Chains(7M7W.pdb ): R versus H

Chains(7M7W_india_mut.pdb ) R versus H

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7M7W 2136 35 8 10 0 0 1 54
B7M7W_india_mut 2136 35 8 10 0 0 1 54

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
H-R H-R W107 F377 W107 F377 Hydrophobic Hydrophobic 0.0 View
H-R H-R Y104 K378 Y104 K378 Hydrophobic Hydrophobic 0.0 View
H-R H-R W107 F374 W107 F374 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-R H-R W107 F377 W107 F377 Hydrophobic Hydrophobic 0.0 View
H-R H-R Y32 P384 Y32 P384 Hydrophobic Hydrophobic 0.0 View
H-R H-R Y105 C379 Y105 C379 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-R H-R Y104 K378 Y104 K378 Hydrophobic Hydrophobic 0.0 View
H-R H-R W107 Y369 W107 Y369 Hydrophobic Hydrophobic 0.0 View
H-R H-R W107 F377 W107 F377 Hydrophobic Hydrophobic 0.0 View
H-R H-R Y32 T385 Y32 T385 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-R H-R W107 S375 W107 S375 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-R H-R Y104 K378 Y104 K378 Hydrophobic Hydrophobic 0.0 View
H-R H-R M54 Y369 M54 Y369 Hydrophobic Hydrophobic 0.0 View
H-R H-R W107 F377 W107 F377 Hydrophobic Hydrophobic 0.0 View
H-R H-R W107 F377 W107 F377 Hydrophobic Hydrophobic 0.0 View
H-R H-R D110 K378 D110 K378 Attractive Attractive 0.0 View
H-R H-R Y104 K378 Y104 K378 Hydrophobic Hydrophobic 0.0 View
H-R H-R M57 A372 M57 A372 Hydrophobic Hydrophobic 0.0 View
H-R H-R W107 F377 W107 F377 Hydrophobic Hydrophobic 0.0 View
H-R H-R Y104 K378 Y104 K378 Hydrophobic Hydrophobic 0.0 View
H-R H-R M54 Y369 M54 Y369 Hydrophobic Hydrophobic 0.0 View
H-R H-R Y104 K378 Y104 K378 Hydrophobic Hydrophobic 0.0 View
H-R H-R Y104 K378 Y104 K378 Hydrophobic Hydrophobic 0.0 View
H-R H-R D110 R408 D110 R408 Attractive Attractive 0.0 View
H-R H-R W107 F377 W107 F377 Hydrophobic Hydrophobic 0.0 View
H-R H-R Y104 Y380 Y104 Y380 Hydrophobic Hydrophobic 0.0 View
H-R H-R W107 F377 W107 F377 Hydrophobic Hydrophobic 0.0 View
H-R H-R M54 Y369 M54 Y369 Hydrophobic Hydrophobic 0.0 View
H-R H-R Y104 K378 Y104 K378 Hydrophobic Hydrophobic 0.0 View
H-R H-R Y104 K378 Y104 K378 Hydrophobic Hydrophobic 0.0 View
H-R H-R S55 Y369 S55 Y369 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-R H-R D110 R408 D110 R408 Attractive Attractive 0.0 View
H-R H-R Y104 K378 Y104 K378 Hydrophobic Hydrophobic 0.0 View
H-R H-R Y104 K378 Y104 K378 Hydrophobic Hydrophobic 0.0 View
H-R H-R Y104 K378 Y104 K378 Hydrophobic Hydrophobic 0.0 View
H-R H-R Y105 C379 Y105 C379 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-R H-R D110 R408 D110 R408 Attractive Attractive 0.0 View
H-R H-R D110 R408 D110 R408 Attractive Attractive 0.0 View
H-R H-R Y104 Y380 Y104 Y380 Hydrophobic Hydrophobic 0.0 View
H-R H-R D110 R408 D110 R408 Attractive Hydrogen Bonds Attractive Hydrogen Bonds 0.0 View
H-R H-R W107 F377 W107 F377 Aromatic Stacking Aromatic Stacking 0.0 View
H-R H-R W107 F377 W107 F377 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-R H-R Y104 K378 Y104 K378 Hydrophobic Hydrophobic 0.0 View
H-R H-R D110 R408 D110 R408 Attractive Attractive 0.0 View
H-R H-R Y104 K378 Y104 K378 Hydrophobic Hydrophobic 0.0 View
H-R H-R W107 F377 W107 F377 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-R H-R D110 R408 D110 R408 Attractive Hydrogen Bonds Attractive Hydrogen Bonds 0.0 View
H-R H-R Y104 K378 Y104 K378 Hydrophobic Hydrophobic 0.0 View
H-R H-R M54 T385 M54 T385 Hydrophobic Hydrophobic 0.0 View
H-R H-R W107 F377 W107 F377 Hydrophobic Hydrophobic 0.0 View
H-R H-R W107 F377 W107 F377 Hydrophobic Hydrophobic 0.0 View
H-R H-R W107 F377 W107 F377 Hydrophobic Hydrophobic 0.0 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7M7W | 7M7W_india_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph