VTR

28 main matches found (31 matches in total )

Execution time: 19.0 seconds

Match RMSD = 0.0

VTR = 0.0

Average AVD = 0.0 Å

Parameters

Chains(7M6I.pdb ): B versus L

Chains(7M6I_india_mut.pdb ) B versus L

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7M6I 3428 3 3 10 0 15 0 31
B7M6I_india_mut 3428 3 3 10 0 15 0 31

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
B-L B-L D405 R18 D405 R18 Attractive Attractive 0.0 View
B-L B-L D405 R54 D405 R54 Attractive Attractive 0.0 View
B-L B-L T376 S30 T376 S30 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-L B-L R408 R54 R408 R54 Repulsive Repulsive 0.0 View
B-L B-L R408 R54 R408 R54 Repulsive Repulsive 0.0 View
B-L B-L S375 S30 S375 S30 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-L B-L R408 R54 R408 R54 Repulsive Repulsive 0.0 View
B-L B-L R408 R54 R408 R54 Repulsive Repulsive 0.0 View
B-L B-L R408 R54 R408 R54 Repulsive Repulsive 0.0 View
B-L B-L S375 S67 S375 S67 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-L B-L R408 R54 R408 R54 Repulsive Repulsive 0.0 View
B-L B-L R408 R54 R408 R54 Repulsive Repulsive 0.0 View
B-L B-L D405 R18 D405 R18 Attractive Attractive 0.0 View
B-L B-L R408 G64 R408 G64 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-L B-L T376 S30 T376 S30 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-L B-L R408 G64 R408 G64 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-L B-L R408 R54 R408 R54 Repulsive Repulsive 0.0 View
B-L B-L R408 R54 R408 R54 Repulsive Repulsive 0.0 View
B-L B-L Y508 S67 Y508 S67 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-L B-L Y508 S67 Y508 S67 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-L B-L V503 T72 V503 T72 Hydrophobic Hydrophobic 0.0 View
B-L B-L R408 R54 R408 R54 Repulsive Repulsive 0.0 View
B-L B-L R408 G64 R408 G64 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-L B-L V503 T20 V503 T20 Hydrophobic Hydrophobic 0.0 View
B-L B-L R408 R54 R408 R54 Repulsive Repulsive 0.0 View
B-L B-L V503 T72 V503 T72 Hydrophobic Hydrophobic 0.0 View
B-L B-L R408 R54 R408 R54 Repulsive Repulsive 0.0 View
B-L B-L R408 R54 R408 R54 Repulsive Repulsive 0.0 View
B-L B-L R408 R54 R408 R54 Repulsive Repulsive 0.0 View
B-L B-L Y508 D70 Y508 D70 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-L B-L R408 R54 R408 R54 Repulsive Repulsive 0.0 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7M6I | 7M6I_india_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph