VTR

11 main matches found (33 matches in total )

Execution time: 3.0 seconds

Match RMSD = 0.0

VTR = 0.0

Average AVD = 0.0 Å

Parameters

Chains(7LXW.pdb ): A versus H

Chains(7LXW_india_mut.pdb ) A versus H

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7LXW 317 22 0 10 0 0 1 33
B7LXW_india_mut 317 22 0 10 0 0 1 33

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
H-A H-A W52 V16 W52 V16 Hydrophobic Hydrophobic 0.0 View
H-A H-A W106 F140 W106 F140 Hydrophobic Hydrophobic 0.0 View
H-A H-A W106 Y144 W106 Y144 Hydrophobic Hydrophobic 0.0 View
H-A H-A W52 V16 W52 V16 Hydrophobic Hydrophobic 0.0 View
H-A H-A W106 E156 W106 E156 Hydrophobic Hydrophobic 0.0 View
H-A H-A W106 F140 W106 F140 Hydrophobic Hydrophobic 0.0 View
H-A H-A W106 F140 W106 F140 Hydrophobic Hydrophobic 0.0 View
H-A H-A W106 F140 W106 F140 Aromatic Stacking Aromatic Stacking 0.0 View
H-A H-A W106 L244 W106 L244 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-A H-A S56 N17 S56 N17 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-A H-A W106 L244 W106 L244 Hydrophobic Hydrophobic 0.0 View
H-A H-A W52 V16 W52 V16 Hydrophobic Hydrophobic 0.0 View
H-A H-A W106 E156 W106 E156 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-A H-A W106 V16 W106 V16 Hydrophobic Hydrophobic 0.0 View
H-A H-A S104 Y144 S104 Y144 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-A H-A W106 F140 W106 F140 Hydrophobic Hydrophobic 0.0 View
H-A H-A W106 F140 W106 F140 Hydrophobic Hydrophobic 0.0 View
H-A H-A W106 F140 W106 F140 Hydrophobic Hydrophobic 0.0 View
H-A H-A W106 Y144 W106 Y144 Hydrophobic Hydrophobic 0.0 View
H-A H-A W106 F140 W106 F140 Hydrophobic Hydrophobic 0.0 View
H-A H-A S56 N17 S56 N17 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-A H-A W106 V143 W106 V143 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-A H-A W106 F140 W106 F140 Hydrophobic Hydrophobic 0.0 View
H-A H-A N57 N17 N57 N17 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-A H-A W106 E156 W106 E156 Hydrophobic Hydrophobic 0.0 View
H-A H-A S103 K147 S103 K147 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-A H-A S105 E156 S105 E156 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-A H-A W106 L18 W106 L18 Hydrophobic Hydrophobic 0.0 View
H-A H-A W106 L249 W106 L249 Hydrophobic Hydrophobic 0.0 View
H-A H-A N57 N17 N57 N17 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-A H-A W106 F140 W106 F140 Hydrophobic Hydrophobic 0.0 View
H-A H-A W106 L249 W106 L249 Hydrophobic Hydrophobic 0.0 View
H-A H-A F59 V16 F59 V16 Hydrophobic Hydrophobic 0.0 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7LXW | 7LXW_india_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph