VTR

14 main matches found (29 matches in total )

Execution time: 10.0 seconds

Match RMSD = 0.0

VTR = 0.0

Average AVD = 0.0 Å

Parameters

Chains(7L0N.pdb ): S versus N

Chains(7L0N_india_mut.pdb ) S versus N

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7L0N 3304 15 1 12 0 0 1 29
B7L0N_india_mut 3304 15 1 12 0 0 1 29

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
N-S N-S Y92 Y380 Y92 Y380 Hydrophobic Hydrophobic 0.0 View
N-S N-S T96 K378 T96 K378 Hydrophobic Hydrophobic 0.0 View
N-S N-S S94 C379 S94 C379 Hydrogen Bonds Hydrogen Bonds 0.0 View
N-S N-S Y97 S383 Y97 S383 Hydrogen Bonds Hydrogen Bonds 0.0 View
N-S N-S Y92 P412 Y92 P412 Hydrophobic Hydrophobic 0.0 View
N-S N-S D1 K378 D1 K378 Attractive Attractive 0.0 View
N-S N-S T96 K378 T96 K378 Hydrophobic Hydrophobic 0.0 View
N-S N-S Y92 Y380 Y92 Y380 Hydrophobic Hydrophobic 0.0 View
N-S N-S V93 Y380 V93 Y380 Hydrophobic Hydrophobic 0.0 View
N-S N-S Y92 P412 Y92 P412 Hydrophobic Hydrophobic 0.0 View
N-S N-S S94 V382 S94 V382 Hydrogen Bonds Hydrogen Bonds 0.0 View
N-S N-S Q27 G413 Q27 G413 Hydrogen Bonds Hydrogen Bonds 0.0 View
N-S N-S S94 C379 S94 C379 Hydrogen Bonds Hydrogen Bonds 0.0 View
N-S N-S Y92 F429 Y92 F429 Hydrogen Bonds Hydrogen Bonds 0.0 View
N-S N-S Y92 D427 Y92 D427 Hydrogen Bonds Hydrogen Bonds 0.0 View
N-S N-S V93 Y380 V93 Y380 Hydrophobic Hydrophobic 0.0 View
N-S N-S Q27 P412 Q27 P412 Hydrogen Bonds Hydrogen Bonds 0.0 View
N-S N-S Y92 Y380 Y92 Y380 Hydrophobic Hydrophobic 0.0 View
N-S N-S Y92 Y380 Y92 Y380 Hydrophobic Hydrophobic 0.0 View
N-S N-S Y92 Y380 Y92 Y380 Hydrophobic Hydrophobic 0.0 View
N-S N-S Y32 G381 Y32 G381 Hydrogen Bonds Hydrogen Bonds 0.0 View
N-S N-S Y92 Y380 Y92 Y380 Hydrophobic Hydrophobic 0.0 View
N-S N-S Y92 F429 Y92 F429 Hydrogen Bonds Hydrogen Bonds 0.0 View
N-S N-S V93 Y380 V93 Y380 Hydrophobic Hydrophobic 0.0 View
N-S N-S S94 C379 S94 C379 Hydrogen Bonds Hydrogen Bonds 0.0 View
N-S N-S Y92 G381 Y92 G381 Hydrogen Bonds Hydrogen Bonds 0.0 View
N-S N-S Y92 Y380 Y92 Y380 Aromatic Stacking Aromatic Stacking 0.0 View
N-S N-S V93 K378 V93 K378 Hydrophobic Hydrophobic 0.0 View
N-S N-S V93 Y380 V93 Y380 Hydrophobic Hydrophobic 0.0 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7L0N | 7L0N_india_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph