VTR

25 main matches found (33 matches in total )

Execution time: 96.0 seconds

Match RMSD = 0.0

VTR = 0.0

Average AVD = 0.0 Å

Parameters

Chains(7KXJ.pdb ): A versus L

Chains(7KXJ_india_mut.pdb ) A versus L

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7KXJ 4389 8 11 13 0 1 3 36
B7KXJ_india_mut 4389 8 11 13 0 1 3 36

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
A-L A-L Y505 L67 Y505 L67 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-L A-L Y421 R80 Y421 R80 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-L A-L R403 D66 R403 D66 Attractive Attractive 0.0 View
A-L A-L F486 Y114 F486 Y114 Hydrophobic Hydrophobic 0.0 View
A-L A-L F456 H108 F456 H108 Aromatic Stacking Aromatic Stacking 0.0 View
A-L A-L Y473 H108 Y473 H108 Aromatic Stacking Aromatic Stacking 0.0 View
A-L A-L K417 S36 K417 S36 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-L A-L R403 D66 R403 D66 Attractive Hydrogen Bonds Attractive Hydrogen Bonds 0.0 View
A-L A-L F486 Y114 F486 Y114 Hydrophobic Hydrophobic 0.0 View
A-L A-L R403 D66 R403 D66 Attractive Attractive 0.0 View
A-L A-L F486 Y114 F486 Y114 Hydrophobic Hydrophobic 0.0 View
A-L A-L F486 Y114 F486 Y114 Hydrophobic Hydrophobic 0.0 View
A-L A-L F486 Y114 F486 Y114 Aromatic Stacking Aromatic Stacking 0.0 View
A-L A-L Y421 R80 Y421 R80 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-L A-L D420 R80 D420 R80 Attractive Attractive 0.0 View
A-L A-L Y505 S69 Y505 S69 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-L A-L F486 Y114 F486 Y114 Hydrophobic Hydrophobic 0.0 View
A-L A-L Y505 D66 Y505 D66 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-L A-L F486 Y114 F486 Y114 Hydrophobic Hydrophobic 0.0 View
A-L A-L A475 T109 A475 T109 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-L A-L D420 R80 D420 R80 Attractive Attractive 0.0 View
A-L A-L D405 D66 D405 D66 Repulsive Repulsive 0.0 View
A-L A-L N487 Y114 N487 Y114 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-L A-L R403 D66 R403 D66 Attractive Attractive 0.0 View
A-L A-L R403 D66 R403 D66 Attractive Hydrogen Bonds Attractive Hydrogen Bonds 0.0 View
A-L A-L F486 Y114 F486 Y114 Hydrophobic Hydrophobic 0.0 View
A-L A-L R403 D66 R403 D66 Attractive Hydrogen Bonds Attractive Hydrogen Bonds 0.0 View
A-L A-L D420 R80 D420 R80 Attractive Attractive 0.0 View
A-L A-L F486 Y114 F486 Y114 Hydrophobic Hydrophobic 0.0 View
A-L A-L R403 D66 R403 D66 Attractive Attractive 0.0 View
A-L A-L N487 Y114 N487 Y114 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-L A-L R403 D66 R403 D66 Attractive Attractive 0.0 View
A-L A-L K417 S37 K417 S37 Hydrogen Bonds Hydrogen Bonds 0.0 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7KXJ | 7KXJ_india_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph