VTR
11 main matches found
(53 matches in total )Execution time: 28.0 seconds
Match RMSD = 0.25
VTR = 0.0
Average AVD = 0.06 Å
Parameters
Chains(7K43.pdb ): A versus H
Chains(7K43_india_mut.pdb ) A versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
| Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
|---|---|---|---|---|---|---|---|---|
| A7K43 | 3783 | 42 | 0 | 9 | 0 | 0 | 2 | 53 |
| B7K43_india_mut | 3783 | 42 | 0 | 10 | 0 | 0 | 2 | 54 |
Matches
(Conservatives hydrophobic matches are hidden by default)
| Chains | Residues | Contact types | |||||||
|---|---|---|---|---|---|---|---|---|---|
| A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
| A-H | A-H | Y489 | Y103 | Y489 | Y103 | Aromatic Stacking | Aromatic Stacking | 0.0 | View |
| A-H | A-H | E484 | W50 | Q484 | W50 | Hydrophobic | Hydrophobic | 0.02 | View |
| A-H | A-H | Y489 | Y103 | Y489 | Y103 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | Y449 | T30 | Y449 | T30 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F456 | Y103 | F456 | Y103 | Aromatic Stacking | Aromatic Stacking | 0.0 | View |
| A-H | A-H | Y489 | Y103 | Y489 | Y103 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F486 | Y109 | F486 | Y109 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | L452 | I54 | R452 | I54 | Hydrophobic | Hydrophobic | 0.33 | View |
| A-H | A-H | Y489 | F102 | Y489 | F102 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | Q493 | Y103 | Q493 | Y103 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-H | A-H | F456 | Y103 | F456 | Y103 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F490 | I54 | F490 | I54 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F456 | Y103 | F456 | Y103 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F490 | I54 | F490 | I54 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | L455 | Y103 | L455 | Y103 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F490 | I54 | F490 | I54 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | Q493 | T30 | Q493 | T30 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-H | A-H | F456 | Y103 | F456 | Y103 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | Y449 | T77 | Y449 | T77 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F486 | F102 | F486 | F102 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | Y449 | F29 | Y449 | F29 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-H | A-H | E484 | N52 | Q484 | N52 | Hydrogen Bonds | Hydrogen Bonds | 0.66 | View |
| A-H | A-H | F486 | F102 | F486 | F102 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | E484 | S55 | Q484 | S55 | Hydrogen Bonds | Hydrogen Bonds | 0.56 | View |
| A-H | A-H | F456 | Y103 | F456 | Y103 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | Y489 | F102 | Y489 | F102 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | Y449 | T30 | Y449 | T30 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | Y449 | T28 | Y449 | T28 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | L455 | Y103 | L455 | Y103 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F490 | I54 | F490 | I54 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F486 | Y109 | F486 | Y109 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | Y489 | Y103 | Y489 | Y103 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | Y449 | Y27 | Y449 | Y27 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-H | A-H | E484 | S55 | Q484 | S55 | Hydrogen Bonds | Hydrogen Bonds | 1.58 | View |
| A-H | A-H | F456 | Y103 | F456 | Y103 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | Y489 | Y103 | Y489 | Y103 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F456 | Y103 | F456 | Y103 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F456 | Y103 | F456 | Y103 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | Y449 | T77 | Y449 | T77 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F456 | Y103 | F456 | Y103 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | Q493 | T30 | Q493 | T30 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-H | A-H | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F490 | I54 | F490 | I54 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F486 | F102 | F486 | F102 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | Y449 | T30 | Y449 | T30 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F486 | F102 | F486 | F102 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | Y489 | F102 | Y489 | F102 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-H | A-H | Y489 | Y103 | Y489 | Y103 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F490 | I54 | F490 | I54 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F490 | I54 | F490 | I54 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F456 | Y103 | F456 | Y103 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | Y489 | Y103 | Y489 | Y103 | Hydrophobic | Hydrophobic | 0.0 | View |