VTR

6 main matches found (7 matches in total )

Execution time: 10.0 seconds

Match RMSD = 0.0

VTR = 0.0

Average AVD = 0.0 Å

Parameters

Chains(7DPM.pdb ): I versus H

Chains(7DPM_india_mut.pdb ) I versus H

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7DPM 2531 1 0 6 0 0 0 7
B7DPM_india_mut 2531 1 0 6 0 0 0 7

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
H-I H-I S52 Q506 S52 Q506 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-I H-I S53 V503 S53 V503 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-I H-I N92 A372 N92 A372 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-I H-I Y32 F374 Y32 F374 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-I H-I A50 V503 A50 V503 Hydrophobic Hydrophobic 0.0 View
H-I H-I Y32 S373 Y32 S373 Hydrogen Bonds Hydrogen Bonds 0.0 View
H-I H-I Y32 S375 Y32 S375 Hydrogen Bonds Hydrogen Bonds 0.0 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7DPM | 7DPM_india_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph