VTR

19 main matches found (26 matches in total )

Execution time: 48.0 seconds

Match RMSD = 0.0

VTR = 0.0

Average AVD = 0.0 Å

Parameters

Chains(7CZQ.pdb ): A versus K

Chains(7CZQ_india_mut.pdb ) A versus K

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7CZQ 3868 7 1 16 0 1 1 26
B7CZQ_india_mut 3868 7 1 16 0 1 1 26

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
A-K A-K R403 N93 R403 N93 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-K A-K R403 N93 R403 N93 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-K A-K Y505 D92 Y505 D92 Hydrophobic Hydrophobic 0.0 View
A-K A-K D405 L94 D405 L94 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-K A-K Y505 Y32 Y505 Y32 Aromatic Stacking Aromatic Stacking 0.0 View
A-K A-K G502 D28 G502 D28 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-K A-K N501 S30 N501 S30 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-K A-K Y505 I29 Y505 I29 Hydrophobic Hydrophobic 0.0 View
A-K A-K G502 D28 G502 D28 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-K A-K Y505 I29 Y505 I29 Hydrophobic Hydrophobic 0.0 View
A-K A-K R403 Y32 R403 Y32 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-K A-K R408 D92 R408 D92 Attractive Attractive 0.0 View
A-K A-K G502 D28 G502 D28 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-K A-K D405 D92 D405 D92 Repulsive Repulsive 0.0 View
A-K A-K E406 N93 E406 N93 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-K A-K R403 N93 R403 N93 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-K A-K V503 Q27 V503 Q27 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-K A-K Y505 I29 Y505 I29 Hydrophobic Hydrophobic 0.0 View
A-K A-K Y505 Y32 Y505 Y32 Hydrophobic Hydrophobic 0.0 View
A-K A-K E406 N93 E406 N93 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-K A-K E406 N93 E406 N93 Hydrophobic Hydrophobic 0.0 View
A-K A-K Y505 Q90 Y505 Q90 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-K A-K N501 S30 N501 S30 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-K A-K T500 D28 T500 D28 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-K A-K Y505 Y32 Y505 Y32 Hydrophobic Hydrophobic 0.0 View
A-K A-K Y505 Y91 Y505 Y91 Hydrogen Bonds Hydrogen Bonds 0.0 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7CZQ | 7CZQ_india_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph