VTR

17 main matches found (36 matches in total )

Execution time: 20.0 seconds

Match RMSD = 0.0

VTR = 0.0

Average AVD = 0.0 Å

Parameters

Chains(7CWS.pdb ): Q versus E

Chains(7CWS_india_mut.pdb ) Q versus E

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7CWS 4602 19 1 14 0 2 0 36
B7CWS_india_mut 4602 19 1 14 0 2 0 36

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
E-Q E-Q Y104 D405 Y104 D405 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-Q E-Q P103 V407 P103 V407 Hydrophobic Hydrophobic 0.0 View
E-Q E-Q G56 K378 G56 K378 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-Q E-Q P103 V407 P103 V407 Hydrophobic Hydrophobic 0.0 View
E-Q E-Q D102 D405 D102 D405 Repulsive Repulsive 0.0 View
E-Q E-Q D60 P384 D60 P384 Hydrophobic Hydrophobic 0.0 View
E-Q E-Q T69 S383 T69 S383 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-Q E-Q P103 V407 P103 V407 Hydrophobic Hydrophobic 0.0 View
E-Q E-Q L62 Y369 L62 Y369 Hydrophobic Hydrophobic 0.0 View
E-Q E-Q T58 K378 T58 K378 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-Q E-Q K65 T385 K65 T385 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-Q E-Q Y50 F377 Y50 F377 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-Q E-Q Y104 D405 Y104 D405 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-Q E-Q P103 V407 P103 V407 Hydrophobic Hydrophobic 0.0 View
E-Q E-Q D102 D405 D102 D405 Repulsive Repulsive 0.0 View
E-Q E-Q L62 T385 L62 T385 Hydrophobic Hydrophobic 0.0 View
E-Q E-Q L62 Y365 L62 Y365 Hydrophobic Hydrophobic 0.0 View
E-Q E-Q Y101 Q414 Y101 Q414 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-Q E-Q K65 T385 K65 T385 Hydrophobic Hydrophobic 0.0 View
E-Q E-Q Y50 K378 Y50 K378 Hydrophobic Hydrophobic 0.0 View
E-Q E-Q S59 F377 S59 F377 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-Q E-Q T58 K378 T58 K378 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-Q E-Q Y50 K378 Y50 K378 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-Q E-Q Y50 F377 Y50 F377 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-Q E-Q L62 Y365 L62 Y365 Hydrophobic Hydrophobic 0.0 View
E-Q E-Q Y50 T376 Y50 T376 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-Q E-Q L62 Y369 L62 Y369 Hydrophobic Hydrophobic 0.0 View
E-Q E-Q D102 R408 D102 R408 Hydrophobic Hydrophobic 0.0 View
E-Q E-Q L62 Y369 L62 Y369 Hydrophobic Hydrophobic 0.0 View
E-Q E-Q K65 T385 K65 T385 Hydrophobic Hydrophobic 0.0 View
E-Q E-Q D102 R408 D102 R408 Attractive Attractive 0.0 View
E-Q E-Q Y101 R408 Y101 R408 Hydrophobic Hydrophobic 0.0 View
E-Q E-Q Y101 R408 Y101 R408 Hydrophobic Hydrophobic 0.0 View
E-Q E-Q D60 P384 D60 P384 Hydrophobic Hydrophobic 0.0 View
E-Q E-Q P103 V407 P103 V407 Hydrophobic Hydrophobic 0.0 View
E-Q E-Q Y105 T376 Y105 T376 Hydrogen Bonds Hydrogen Bonds 0.0 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7CWS | 7CWS_india_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph