VTR

10 main matches found (15 matches in total )

Execution time: 20.0 seconds

Match RMSD = 0.0

VTR = 0.0

Average AVD = 0.0 Å

Parameters

Chains(7CWS.pdb ): Q versus D

Chains(7CWS_india_mut.pdb ) Q versus D

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7CWS 4602 5 0 9 0 0 1 15
B7CWS_india_mut 4602 5 0 9 0 0 1 15

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
D-Q D-Q Y95 S375 Y95 S375 Hydrogen Bonds Hydrogen Bonds 0.0 View
D-Q D-Q W93 F377 W93 F377 Hydrophobic Hydrophobic 0.0 View
D-Q D-Q F92 S375 F92 S375 Hydrogen Bonds Hydrogen Bonds 0.0 View
D-Q D-Q F92 S375 F92 S375 Hydrogen Bonds Hydrogen Bonds 0.0 View
D-Q D-Q W93 F374 W93 F374 Hydrogen Bonds Hydrogen Bonds 0.0 View
D-Q D-Q N91 S375 N91 S375 Hydrogen Bonds Hydrogen Bonds 0.0 View
D-Q D-Q W93 S375 W93 S375 Hydrogen Bonds Hydrogen Bonds 0.0 View
D-Q D-Q W93 Y365 W93 Y365 Hydrophobic Hydrophobic 0.0 View
D-Q D-Q W93 F377 W93 F377 Hydrophobic Hydrophobic 0.0 View
D-Q D-Q N31 V503 N31 V503 Hydrophobic Hydrophobic 0.0 View
D-Q D-Q N31 V503 N31 V503 Hydrophobic Hydrophobic 0.0 View
D-Q D-Q N91 S375 N91 S375 Hydrogen Bonds Hydrogen Bonds 0.0 View
D-Q D-Q Y95 T376 Y95 T376 Hydrogen Bonds Hydrogen Bonds 0.0 View
D-Q D-Q F92 F374 F92 F374 Hydrogen Bonds Hydrogen Bonds 0.0 View
D-Q D-Q W93 F377 W93 F377 Aromatic Stacking Aromatic Stacking 0.0 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7CWS | 7CWS_india_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph