VTR

12 main matches found (16 matches in total )

Execution time: 24.0 seconds

Match RMSD = 0.0

VTR = 0.0

Average AVD = 0.0 Å

Parameters

Chains(7CAK.pdb ): C versus I

Chains(7CAK_india_mut.pdb ) C versus I

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7CAK 3771 4 7 6 0 0 0 17
B7CAK_india_mut 3771 4 7 6 0 0 0 17

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
C-I C-I T376 Y50 T376 Y50 Hydrogen Bonds Hydrogen Bonds 0.0 View
C-I C-I R408 D102 R408 D102 Attractive Attractive 0.0 View
C-I C-I R408 D102 R408 D102 Attractive Attractive 0.0 View
C-I C-I Y369 L62 Y369 L62 Hydrophobic Hydrophobic 0.0 View
C-I C-I S383 T69 S383 T69 Hydrogen Bonds Hydrogen Bonds 0.0 View
C-I C-I R408 D102 R408 D102 Attractive Attractive 0.0 View
C-I C-I Y365 L62 Y365 L62 Hydrophobic Hydrophobic 0.0 View
C-I C-I R408 D102 R408 D102 Attractive Attractive 0.0 View
C-I C-I K378 G56 K378 G56 Hydrogen Bonds Hydrogen Bonds 0.0 View
C-I C-I K378 T58 K378 T58 Hydrogen Bonds Hydrogen Bonds 0.0 View
C-I C-I T385 K65 T385 K65 Hydrophobic Hydrophobic 0.0 View
C-I C-I R408 D102 R408 D102 Attractive Attractive 0.0 View
C-I C-I T385 K65 T385 K65 Hydrophobic Hydrophobic 0.0 View
C-I C-I R408 D102 R408 D102 Attractive Attractive 0.0 View
C-I C-I R408 D102 R408 D102 Attractive Hydrogen Bonds Attractive Hydrogen Bonds 0.0 View
C-I C-I K378 T58 K378 T58 Hydrogen Bonds Hydrogen Bonds 0.0 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7CAK | 7CAK_india_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph