VTR

33 main matches found (46 matches in total )

Execution time: 10.0 seconds

Match RMSD = 0.0

VTR = 0.0

Average AVD = 0.0 Å

Parameters

Chains(7BEI.pdb ): E versus L

Chains(7BEI_india_mut.pdb ) E versus L

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7BEI 625 13 10 23 0 2 1 49
B7BEI_india_mut 625 13 10 23 0 2 1 49

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
L-E L-E G68 Q498 G68 Q498 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E Y94 D405 Y94 D405 Hydrophobic Hydrophobic 0.0 View
L-E L-E S30 N501 S30 N501 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E D92 K417 D92 K417 Attractive Hydrogen Bonds Attractive Hydrogen Bonds 0.0 View
L-E L-E L91 Y505 L91 Y505 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E D92 R403 D92 R403 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E Y32 Y505 Y32 Y505 Hydrophobic Hydrophobic 0.0 View
L-E L-E G28 G502 G28 G502 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E D92 R403 D92 R403 Attractive Attractive 0.0 View
L-E L-E I2 Y505 I2 Y505 Hydrophobic Hydrophobic 0.0 View
L-E L-E Y32 Y505 Y32 Y505 Aromatic Stacking Aromatic Stacking 0.0 View
L-E L-E D92 Y505 D92 Y505 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E Q90 Y505 Q90 Y505 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E G28 T500 G28 T500 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E S30 G496 S30 G496 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E D92 R403 D92 R403 Attractive Hydrogen Bonds Attractive Hydrogen Bonds 0.0 View
L-E L-E I2 Y505 I2 Y505 Hydrophobic Hydrophobic 0.0 View
L-E L-E Y94 R408 Y94 R408 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E S67 Q498 S67 Q498 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E S93 Y505 S93 Y505 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E D92 R403 D92 R403 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E Y94 R408 Y94 R408 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E S30 N501 S30 N501 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E D92 E406 D92 E406 Repulsive Repulsive 0.0 View
L-E L-E Y32 Y453 Y32 Y453 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E I29 Y505 I29 Y505 Hydrophobic Hydrophobic 0.0 View
L-E L-E S67 Q498 S67 Q498 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E S30 N501 S30 N501 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E D92 R403 D92 R403 Attractive Attractive 0.0 View
L-E L-E Y32 Y505 Y32 Y505 Hydrophobic Hydrophobic 0.0 View
L-E L-E D92 E406 D92 E406 Repulsive Repulsive 0.0 View
L-E L-E D92 R403 D92 R403 Attractive Attractive 0.0 View
L-E L-E Y94 D405 Y94 D405 Hydrophobic Hydrophobic 0.0 View
L-E L-E Y32 Y505 Y32 Y505 Hydrophobic Hydrophobic 0.0 View
L-E L-E Y32 Y505 Y32 Y505 Hydrophobic Hydrophobic 0.0 View
L-E L-E D92 R403 D92 R403 Attractive Attractive 0.0 View
L-E L-E Y32 Y505 Y32 Y505 Hydrophobic Hydrophobic 0.0 View
L-E L-E D92 R403 D92 R403 Attractive Attractive 0.0 View
L-E L-E Y32 Y505 Y32 Y505 Hydrophobic Hydrophobic 0.0 View
L-E L-E D92 R403 D92 R403 Attractive Attractive 0.0 View
L-E L-E Y32 Y505 Y32 Y505 Hydrophobic Hydrophobic 0.0 View
L-E L-E Y32 Y505 Y32 Y505 Hydrophobic Hydrophobic 0.0 View
L-E L-E D92 K417 D92 K417 Attractive Hydrogen Bonds Attractive Hydrogen Bonds 0.0 View
L-E L-E D92 R403 D92 R403 Attractive Attractive 0.0 View
L-E L-E S30 Q498 S30 Q498 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E S30 Q498 S30 Q498 Hydrogen Bonds Hydrogen Bonds 0.0 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7BEI | 7BEI_india_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph