VTR

6 main matches found (19 matches in total )

Execution time: 10.0 seconds

Match RMSD = 0.0

VTR = 0.0

Average AVD = 0.0 Å

Parameters

Chains(7MMO.pdb ): C versus B

Chains(7MMO_brazil_mut.pdb ) C versus B

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7MMO 1215 13 0 6 0 0 0 19
B7MMO_brazil_mut 1215 13 0 6 0 0 0 19

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
B-C B-C Y94 P499 Y94 P499 Hydrophobic Hydrophobic 0.0 View
B-C B-C T96 G446 T96 G446 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-C B-C Y94 P499 Y94 P499 Hydrophobic Hydrophobic 0.0 View
B-C B-C E53 N440 E53 N440 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-C B-C Y94 P499 Y94 P499 Hydrophobic Hydrophobic 0.0 View
B-C B-C Y94 P499 Y94 P499 Hydrophobic Hydrophobic 0.0 View
B-C B-C Y94 P499 Y94 P499 Hydrophobic Hydrophobic 0.0 View
B-C B-C D32 T500 D32 T500 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-C B-C Y35 P499 Y35 P499 Hydrophobic Hydrophobic 0.0 View
B-C B-C Y35 P499 Y35 P499 Hydrophobic Hydrophobic 0.0 View
B-C B-C T96 Q498 T96 Q498 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-C B-C Y35 N439 Y35 N439 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-C B-C Y35 N440 Y35 N440 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-C B-C Y94 P499 Y94 P499 Hydrophobic Hydrophobic 0.0 View
B-C B-C Y94 P499 Y94 P499 Hydrophobic Hydrophobic 0.0 View
B-C B-C Y94 P499 Y94 P499 Hydrophobic Hydrophobic 0.0 View
B-C B-C Y94 V445 Y94 V445 Hydrophobic Hydrophobic 0.0 View
B-C B-C Y94 V445 Y94 V445 Hydrophobic Hydrophobic 0.0 View
B-C B-C Y94 T500 Y94 T500 Hydrophobic Hydrophobic 0.0 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7MMO | 7MMO_brazil_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph