VTR

6 main matches found (7 matches in total )

Execution time: 26.0 seconds

Match RMSD = 0.0

VTR = 0.0

Average AVD = 0.0 Å

Parameters

Chains(7LS9.pdb ): C versus G

Chains(7LS9_brazil_mut.pdb ) C versus G

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7LS9 3948 1 0 6 0 0 0 7
B7LS9_brazil_mut 3948 1 0 6 0 0 0 7

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
C-G C-G Y449 Y32 Y449 Y32 Hydrophobic Hydrophobic 0.0 View
C-G C-G G446 Y49 G446 Y49 Hydrogen Bonds Hydrogen Bonds 0.0 View
C-G C-G Q493 S30 Q493 S30 Hydrogen Bonds Hydrogen Bonds 0.0 View
C-G C-G Q498 S53 Q498 S53 Hydrogen Bonds Hydrogen Bonds 0.0 View
C-G C-G Q498 S53 Q498 S53 Hydrogen Bonds Hydrogen Bonds 0.0 View
C-G C-G G446 Y49 G446 Y49 Hydrogen Bonds Hydrogen Bonds 0.0 View
C-G C-G S494 Y32 S494 Y32 Hydrogen Bonds Hydrogen Bonds 0.0 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7LS9 | 7LS9_brazil_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph