VTR
3 main matches found
(6 matches in total )Execution time: 34.0 seconds
Match RMSD = 0.02
VTR = 0.0
Average AVD = 0.01 Å
Parameters
Chains(7LD1.pdb ): A versus O
Chains(7LD1_brazil_mut.pdb ) A versus O
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
| Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
|---|---|---|---|---|---|---|---|---|
| A7LD1 | 4251 | 3 | 0 | 3 | 0 | 0 | 0 | 6 |
| B7LD1_brazil_mut | 4251 | 5 | 0 | 3 | 0 | 0 | 0 | 8 |
Matches
(Conservatives hydrophobic matches are hidden by default)
| Chains | Residues | Contact types | |||||||
|---|---|---|---|---|---|---|---|---|---|
| A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
| A-O | A-O | Y505 | P120 | Y505 | P120 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-O | A-O | D405 | Y50 | D405 | Y50 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-O | A-O | Q409 | Y50 | Q409 | Y50 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-O | A-O | D405 | Y117 | D405 | Y117 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-O | A-O | Y505 | D20 | Y505 | D20 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-O | A-O | K417 | S51 | T417 | S51 | Hydrogen Bonds | Hydrogen Bonds | 0.05 | View |