VTR
7 main matches found
(22 matches in total )Execution time: 11.0 seconds
Match RMSD = 0.47
VTR = 0.0
Average AVD = 0.19 Å
Parameters
Chains(7L5B.pdb ): A versus H
Chains(7L5B_brazil_mut.pdb ) A versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
| Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
|---|---|---|---|---|---|---|---|---|
| A7L5B | 599 | 16 | 0 | 6 | 0 | 1 | 0 | 23 |
| B7L5B_brazil_mut | 599 | 17 | 1 | 7 | 0 | 0 | 0 | 25 |
Matches
(Conservatives hydrophobic matches are hidden by default)
| Chains | Residues | Contact types | |||||||
|---|---|---|---|---|---|---|---|---|---|
| A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
| A-H | A-H | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 0.56 | View |
| A-H | A-H | L452 | I54 | L452 | I54 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 0.14 | View |
| A-H | A-H | E484 | Y33 | F490 | Y33 | Hydrogen Bonds | Hydrogen Bonds | 1.87 | View |
| A-H | A-H | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 0.56 | View |
| A-H | A-H | Y449 | T30 | Y449 | T30 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | Y449 | Y27 | Y449 | Y27 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-H | A-H | Y449 | T30 | Y449 | T30 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | Q493 | I54 | Q493 | I54 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F490 | I54 | F490 | I54 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | S494 | T30 | S494 | T30 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-H | A-H | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 0.14 | View |
| A-H | A-H | Y449 | T30 | Y449 | T30 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | V483 | N59 | V483 | N59 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | E484 | N59 | K484 | N59 | Hydrogen Bonds | Hydrogen Bonds | 0.13 | View |
| A-H | A-H | Y449 | T30 | Y449 | T30 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F490 | I54 | F490 | I54 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | Y449 | S77 | Y449 | S77 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-H | A-H | Y449 | F29 | Y449 | F29 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-H | A-H | E484 | D56 | K484 | D56 | Repulsive | Attractive Hydrogen Bonds | 0.82 | View |