VTR
17 main matches found
(33 matches in total )Execution time: 12.0 seconds
Match RMSD = 0.25
VTR = 0.0
Average AVD = 0.04 Å
Parameters
Chains(7KMI.pdb ): C versus A
Chains(7KMI_brazil_mut.pdb ) C versus A
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
| Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
|---|---|---|---|---|---|---|---|---|
| A7KMI | 627 | 17 | 1 | 15 | 0 | 0 | 1 | 34 |
| B7KMI_brazil_mut | 627 | 16 | 0 | 16 | 0 | 0 | 1 | 33 |
Matches
(Conservatives hydrophobic matches are hidden by default)
| Chains | Residues | Contact types | |||||||
|---|---|---|---|---|---|---|---|---|---|
| A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
| A-C | A-C | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | V99 | Y489 | V99 | Y489 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | G54 | Y421 | G54 | Y421 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | R97 | Y489 | R97 | Y489 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | G54 | K458 | G54 | K458 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | R97 | Y489 | R97 | Y489 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | V99 | Y489 | V99 | Y489 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | Y52 | Y421 | Y52 | Y421 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | Y33 | L455 | Y33 | L455 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | V2 | F486 | V2 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | S56 | D420 | S56 | D420 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | A100 | L455 | A100 | L455 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | R97 | N487 | R97 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | N32 | A475 | N32 | A475 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | Y33 | F456 | Y33 | F456 | Aromatic Stacking | Aromatic Stacking | 0.0 | View |
| A-C | A-C | S31 | Y473 | S31 | Y473 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | Y105 | F486 | Y105 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | V2 | F486 | V2 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | S56 | D420 | S56 | D420 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | V2 | F486 | V2 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | T28 | A475 | T28 | A475 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | V99 | F456 | V99 | F456 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | Y33 | L455 | Y33 | L455 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | Y105 | F486 | Y105 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | G54 | N460 | G54 | N460 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | R97 | N487 | R97 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | T28 | A475 | T28 | A475 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | G26 | N487 | G26 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | Y33 | L455 | Y33 | L455 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | Y52 | K417 | Y52 | T417 | Hydrophobic | Hydrogen Bonds | 1.44 | View |